| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,382,824 | (A)8→9 | coding (112/1212 nt) | elaD → | protease ElaD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,382,816 | 1 | . | A | 100.0% | 41.9 / NA | 13 | L35* (TTA→TAA) | elaD | protease ElaD |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (7/6); total (7/6) | |||||||||||
TTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATAA > NC_000913/2382736‑2382888 | ttattGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCttt < 1:423127/81‑1 (MQ=255) ttATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑‑aaaaaaaaac < 2:423128/81‑3 (MQ=255) tATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑‑aaaaaaaaa > 2:423149/1‑78 (MQ=255) tATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑‑aaaaaaaaa > 2:423145/1‑78 (MQ=255) ctcAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCg > 2:423133/1‑81 (MQ=255) cAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGt > 2:423147/1‑80 (MQ=255) aaCGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTAt > 1:423144/1‑81 (MQ=255) aaCTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGga < 2:423129/81‑1 (MQ=255) agtcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGAt < 2:423130/79‑1 (MQ=255) cagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGATgaag > 2:423150/1‑80 (MQ=255) cAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAg > 2:423152/1‑81 (MQ=255) aaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACt < 2:423131/81‑1 (MQ=255) cTGTGACCGAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCataa < 1:423132/80‑1 (MQ=255) gAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGt > 2:423148/1‑80 (MQ=255) gAGGAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGt > 1:423146/1‑80 (MQ=255) gAATTACTGCAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAgg < 1:423133/81‑1 (MQ=255) cAGTCTTTA‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATaa < 2:423134/81‑1 (MQ=255) | TTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑‑AAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATAA > NC_000913/2382736‑2382888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |