| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,498,047 | (G)6→7 | intergenic (+107/‑225) | intB → / → insC‑6 | KpLE2 phage‑like element; putative integrase/KpLE2 phage‑like element; IS2 insertion element repressor InsA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,498,041 | 1 | . | G | 100.0% | 49.5 / NA | 16 | intergenic (+101/‑231) | intB/insC‑6 | KpLE2 phage‑like element; putative integrase/KpLE2 phage‑like element; IS2 insertion element repressor InsA |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (5/11); total (5/11) | |||||||||||
ATTCTAGGATTATTTTCTTTGTTAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCA‑GGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAA > NC_000913/4497967‑4498112 | attCTAGGATTATTTTCTTTGTTAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCA‑gggggg > 1:931559/1‑81 (MQ=255) tAGGATTATTTTCTTTGTTAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCA‑gggggggat > 2:931565/1‑77 (MQ=255) tGTTAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCcgcg < 2:931542/79‑1 (MQ=255) tGTTAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCgg < 2:931543/80‑1 (MQ=255) ttAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGtt < 1:931544/80‑1 (MQ=255) ttAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTa > 1:931566/1‑81 (MQ=255) aaaGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCat > 1:931564/1‑81 (MQ=255) aaGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCatt < 1:931545/81‑1 (MQ=255) aCAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCattatt < 2:931546/81‑1 (MQ=255) aaaCGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCAttattta > 1:931568/1‑81 (MQ=255) aCGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCATTATTtata < 2:931547/81‑1 (MQ=255) ttAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACAtt < 1:931549/81‑1 (MQ=255) ttAACTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACAtt < 2:931548/81‑1 (MQ=255) aCTGATGTATTTACTATTTACCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCaa > 1:931570/1‑81 (MQ=255) tacCGCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCAt < 2:931550/80‑1 (MQ=255) acCGCTCCCTGCAGGGGGGGATTATCAGAATCCGAGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATa < 1:931551/80‑1 (MQ=255) gCTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATaaaa > 2:931563/1‑80 (MQ=255) cTCCCTGCAGGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATaaaaaa < 2:931552/81‑1 (MQ=255) | ATTCTAGGATTATTTTCTTTGTTAAAAAAGACAAACGGTATTAACTGATGTATTTACTATTTACCGCTCCCTGCA‑GGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAA > NC_000913/4497967‑4498112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |