| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,817,132 | 0 | T | C | 49.2% | 2.2 / 85.2 | 61 | G124G (GGA→GGG) | yqaB | fructose‑1‑phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (17/14); new base C (18/12); total (35/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: E-value score below prediction cutoff. | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAAC > NC_000913/2817055‑2817211 | aacaaAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAAcccc < 1:507807/81‑1 (MQ=255)aacaaAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATcc > 2:507857/1‑80 (MQ=255) aaaaTGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGt > 2:507868/1‑81 (MQ=255) aaaaTGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGt < 2:507808/81‑1 (MQ=255) aaTGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTgc < 2:507809/81‑1 (MQ=255) aTGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTgcg < 1:507810/81‑1 (MQ=255) tgtgTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTgcgc < 1:507811/81‑1 (MQ=255) gtgtCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTgcgc > 2:507906/1‑80 (MQ=255) tgtCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGcc < 1:507813/80‑1 (MQ=255) tgtCTGGCGCGGGTTTATGGTGTTTGACGTAATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGcc < 2:507812/80‑1 (MQ=255) tgtCTAGCGCGAGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGcc < 2:507814/80‑1 (MQ=255) gtCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAg > 2:507899/1‑81 (MQ=255) tCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAg < 2:507815/80‑1 (MQ=255) gcgcGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATg < 2:507816/81‑1 (MQ=255) gcgGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGcc < 2:507817/81‑1 (MQ=255) tATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCg < 2:507818/80‑1 (MQ=255) tATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCg < 2:507819/80‑1 (MQ=255) tATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGa > 1:507872/1‑81 (MQ=255) aTGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGAt > 1:507877/1‑81 (MQ=255) aTGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGAt > 2:507870/1‑81 (MQ=255) aTGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGAt > 1:507887/1‑81 (MQ=255) tGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGAt < 1:507820/80‑1 (MQ=255) gtgtTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATgg < 2:507822/80‑1 (MQ=255) gtgtTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGgc < 2:507821/81‑1 (MQ=255) gtgtTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGgc > 2:507883/1‑81 (MQ=255) tgtTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGgcg < 2:507823/81‑1 (MQ=255) gtTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGgcgc > 1:507879/1‑81 (MQ=255) gtTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGgcgc > 1:507896/1‑81 (MQ=255) tttGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGgcgc < 2:507824/80‑1 (MQ=255) tttGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGgcgc < 1:507825/80‑1 (MQ=255) ttGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCtt > 2:507876/1‑81 (MQ=255) tGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCttt > 2:507882/1‑81 (MQ=255) gACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCttt < 2:507826/80‑1 (MQ=255) gATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTcc > 1:507900/1‑81 (MQ=255) aTCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTccc > 1:507908/1‑81 (MQ=255) aTCGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTccc > 1:507892/1‑81 (MQ=255) cGGCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCg > 1:507907/1‑81 (MQ=255) ggCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGt > 1:507912/1‑81 (MQ=255) ggCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGt > 2:507905/1‑81 (MQ=255) ggCAGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGt < 1:507827/81‑1 (MQ=255) gCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGGGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGtt < 1:507828/81‑1 (MQ=255) cAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTc < 2:507829/81‑1 (MQ=255) aGCGACGACGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTcc > 1:507904/1‑81 (MQ=255) cgacgaCGGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTa > 2:507861/1‑81 (MQ=255) gacgacGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTa > 1:507909/1‑80 (MQ=255) gacgGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGc > 2:507888/1‑81 (MQ=255) acgGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGc > 2:507875/1‑80 (MQ=255) acgGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGcc < 2:507830/81‑1 (MQ=255) cgGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCa > 2:507915/1‑81 (MQ=255) cgGCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCa > 1:507894/1‑81 (MQ=255) ggCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCAt > 2:507874/1‑81 (MQ=255) ggCGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCAt > 1:507895/1‑81 (MQ=255) cGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTg < 2:507831/81‑1 (MQ=255) cGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTg > 1:507931/1‑81 (MQ=255) cGTCAAAATAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTg > 2:507898/1‑81 (MQ=255) aaaTAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGcga < 2:507832/81‑1 (MQ=255) aaaTAATGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGcga > 1:507889/1‑81 (MQ=255) aataatGGCGTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGcgac > 2:507893/1‑81 (MQ=255) taatGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGcgacga > 2:507878/1‑81 (MQ=255) gTAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGcc < 2:507833/81‑1 (MQ=255) tAACCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGcc > 1:507886/1‑80 (MQ=255) aTCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAAc > 2:507941/1‑81 (MQ=255) | AACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAAC > NC_000913/2817055‑2817211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |