| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 636,750 | G→A | S290F (TCC→TTC) | ybdO ← | putative LysR family DNA‑binding transcriptional regulator YbdO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 636,750 | 0 | G | A | 100.0% | 57.8 / NA | 17 | S290F (TCC→TTC) | ybdO | putative LysR family DNA‑binding transcriptional regulator YbdO |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/8); total (9/8) | |||||||||||
AGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGGAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTCTAGTTT > NC_000913/636681‑636826 | aGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCaaa > 2:138441/1‑81 (MQ=255) aTGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAatt < 1:138428/81‑1 (MQ=255) tGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAatta > 2:138443/1‑81 (MQ=255) aaGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTAttt < 2:138429/81‑1 (MQ=255) aGTTATAGTAGCCGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTa < 1:912336/81‑1 (MQ=255) ttATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTa > 1:138439/1‑79 (MQ=255) tgtAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATttatta > 1:138442/1‑79 (MQ=255) tAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAg > 1:138451/1‑80 (MQ=255) aGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAgg > 2:138444/1‑80 (MQ=255) aGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAgg > 1:138445/1‑80 (MQ=255) tatatCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGt < 1:138430/81‑1 (MQ=255) tcATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTg < 1:138431/79‑1 (MQ=255) aGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAAc > 2:957916/1‑81 (MQ=255) ggTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGAt < 2:138432/81‑1 (MQ=255) aaTAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTc > 1:138447/1‑81 (MQ=255) aaTCGGAAGAACACCAAATTATTTAAAGAAAATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTCTAg < 2:138433/80‑1 (MQ=255) tCGGAAGAACACCAAATTATTTAATGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTCTAGttt < 1:138434/81‑1 (MQ=255) | AGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGGAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTCTAGTTT > NC_000913/636681‑636826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |