| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 855,832 | T→C | intergenic (‑88/‑131) | ldtB ← / → ybiT | L,D‑transpeptidase YbiS/ABC transporter ATP‑binding protein YbiT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 855,832 | 0 | T | C | 100.0% | 53.8 / NA | 17 | intergenic (‑88/‑131) | ldtB/ybiT | L,D‑transpeptidase YbiS/ABC transporter ATP‑binding protein YbiT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/4); total (13/4) | |||||||||||
GATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGACCTTAAGCGAGGAGCAG > NC_000913/855754‑855900 | gaTTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGa < 2:179571/81‑1 (MQ=255) tttGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAAt > 1:179595/1‑81 (MQ=255) tttGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAAt > 1:179599/1‑81 (MQ=255) ttGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAAt > 2:179593/1‑80 (MQ=255) cTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGAtgt > 2:179585/1‑81 (MQ=255) aGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTAc > 2:179592/1‑80 (MQ=255) cATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAAt > 2:179589/1‑81 (MQ=255) tGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATca > 2:179602/1‑80 (MQ=255) gTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACAtt < 1:179572/81‑1 (MQ=255) gagaATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACAttttt > 2:179594/1‑81 (MQ=255) agaATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACAttttt < 2:179573/80‑1 (MQ=255) ttAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACATTTTTTGCCttt > 2:179587/1‑81 (MQ=255) aTTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCtt > 1:179597/1‑79 (MQ=255) ttGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAg > 2:179598/1‑81 (MQ=255) tGGAAGCGCATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAgt > 1:179601/1‑81 (MQ=255) gcgcATTATAAGTTCATTCCAGCTCACAGCGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGa > 1:179606/1‑81 (MQ=255) ccAGCTCACAGCGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGACCTTAAGCGAGGAGCAg < 1:179574/80‑1 (MQ=255) | GATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGACCTTAAGCGAGGAGCAG > NC_000913/855754‑855900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |