| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 914,159 | T→C | E233E (GAA→GAG) | lysO ← | L‑lysine exporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 914,159 | 0 | T | C | 100.0% | 52.2 / NA | 16 | E233E (GAA→GAG) | lysO | L‑lysine exporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (9/7); total (9/7) | |||||||||||
ATGTGGCACCGCATAAGCCCAGTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGTTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTACCGGACCAAAAGATTCGGTCAATAAAATA > NC_000913/914083‑914228 | aTGTGGCACCGCATAAGCCCAGTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCAc < 1:190156/81‑1 (MQ=255) tgGCACCGCATAAGCCCAGTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACgg < 1:190157/80‑1 (MQ=255) ggCACCGCATAAGCCCAGTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGc > 1:190169/1‑81 (MQ=255) aCCGCATAAGCCCAGTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGc > 1:190173/1‑78 (MQ=255) aTAAGCCCAGTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCAt > 1:190217/1‑81 (MQ=255) gTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAAcg < 2:190158/81‑1 (MQ=255) aGTAGAGCGGCTGCGGCGAATAAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAAcgca > 2:190184/1‑78 (MQ=255) gagCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTc > 1:190176/1‑81 (MQ=255) gCGGCTGCGGCGAATCAGCCCAGGGATCAACGTAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTccc < 2:190159/81‑1 (MQ=255) ggCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGa > 1:190186/1‑81 (MQ=255) cggcgAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTAcc < 1:190160/81‑1 (MQ=255) gAATCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTACCGGAc > 2:190180/1‑81 (MQ=255) aTCAGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTACCGGAcc > 1:190181/1‑80 (MQ=255) aGCCCAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTACCGGACCaaa < 2:190161/80‑1 (MQ=255) ccAGGGATCAACATAATAGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTACCGGACCAAAAGAt < 2:190162/81‑1 (MQ=255) ataGCAATCAGCTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTACCGGACCAAAAGATTCGGTCAATAAAATa > 1:190182/1‑81 (MQ=255) | ATGTGGCACCGCATAAGCCCAGTGCAGTAGAGCGGCTGCGGCGAATCAGCCCAGGGATCAACATAATAGCAATCAGTTCACGGGCCAGATCATTAAAAAACGCCGCGCTCCCGATTACCGGACCAAAAGATTCGGTCAATAAAATA > NC_000913/914083‑914228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |