| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 949,466 | T→C | S35G (AGC→GGC) | ycaN ← | putative LysR‑type transcriptional regulator YcaN |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 949,466 | 0 | T | C | 100.0% | 51.0 / NA | 16 | S35G (AGC→GGC) | ycaN | putative LysR‑type transcriptional regulator YcaN |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/11); total (5/11) | |||||||||||
CGTTAACGATACGCTTCGGGTTGTCCGATTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTG > NC_000913/949389‑949542 | cGTTAACGATACGCTTCGGGTTGTCCGATTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAAt < 1:196361/81‑1 (MQ=255) aCGCTTCGGGTTGTCCGATTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAg > 2:196388/1‑81 (MQ=255) cGCTTCGGGTTGTCCGATTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAg < 2:196362/80‑1 (MQ=255) gCTTCGGGTTGTCCGATTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGa > 1:196395/1‑81 (MQ=255) gggTTGTCCGATTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAg < 1:196363/80‑1 (MQ=255) aTTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATc < 1:196364/81‑1 (MQ=255) aTAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCg < 2:196365/81‑1 (MQ=255) aGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTg > 2:196394/1‑81 (MQ=255) gCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGc < 1:196367/81‑1 (MQ=255) gCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGc < 2:196366/81‑1 (MQ=255) gACGTTGTTCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCttt > 2:196391/1‑81 (MQ=255) gttCCAGTGTTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTa < 2:196368/80‑1 (MQ=255) tgtTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCAc < 1:196369/81‑1 (MQ=255) tgtTTTAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCAc < 1:196370/81‑1 (MQ=255) aTGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGt > 1:196400/1‑81 (MQ=255) tGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTg < 2:196371/81‑1 (MQ=255) | CGTTAACGATACGCTTCGGGTTGTCCGATTGAATAAGCGAATTTTAAGACGTTGTTCCAGTGTTTTAATACTATGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTG > NC_000913/949389‑949542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |