| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,088,564 | A→G | Y432H (TAT→CAT) | pgaB ← | poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase and beta‑1,6 glycoside hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,088,564 | 0 | A | G | 100.0% | 62.8 / NA | 19 | Y432H (TAT→CAT) | pgaB | poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase and beta‑1,6 glycoside hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (10/9); total (10/9) | |||||||||||
AGCATGTCCGGCAAGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTCGCGTTAATGTGGGATCTAA > NC_000913/1088487‑1088636 | agcaTGTCCGGCAAGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTg < 1:220403/81‑1 (MQ=255)agcaTGTCCGGCAAGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTg > 2:220434/1‑81 (MQ=255) gcaTGTCCTGCAAGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGAtgttgt > 1:220433/1‑81 (MQ=255) tCCGGCAAGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAgg < 2:220404/81‑1 (MQ=255) ggCAAGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGAt > 1:220428/1‑80 (MQ=255) aGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAAtt > 1:220435/1‑81 (MQ=255) gATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAAttt > 1:220437/1‑81 (MQ=255) gCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAg > 2:220423/1‑81 (MQ=255) gACTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTAttt > 2:220432/1‑81 (MQ=255) aCTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTAtttt < 1:220407/81‑1 (MQ=255) aCTCTGTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTAt < 1:220406/78‑1 (MQ=255) aCTCTGTCATCGAAAGGAGAGAGACGGTAATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTAt < 2:220405/78‑1 (MQ=255) gTCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTcg > 1:220431/1‑81 (MQ=255) tCATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTcgc < 2:220408/81‑1 (MQ=255) cATCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTcgcg > 2:220427/1‑81 (MQ=255) aTCGAAAGGAGAGAGACGGTGATGTTGTTCAGGATGAATTTGTGC‑TTTTTCTCCCCTGTTGGTAAGTATTTTACTCGCGt > 2:220419/1‑80 (MQ=255) gagagagaCGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTCGCGTTAATGTgg > 2:220441/1‑81 (MQ=255) agaCGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTCGCGTTAATGTGGGATCt < 1:220410/81‑1 (MQ=255) agaCGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTCGCGTTAATGTGGGATCt < 1:220409/81‑1 (MQ=255) aCGGTGATGTTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTCGCGTTAATGTGGGATCTaa < 1:220411/81‑1 (MQ=255) | AGCATGTCCGGCAAGATCTTCATATAACATGCCAACTTGTGCTCTGACTCTGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCTGTTGGTAAGTATTTTACTCGCGTTAATGTGGGATCTAA > NC_000913/1088487‑1088636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |