| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,104,203 | A→G | T85A (ACA→GCA) | csgB → | curlin, minor subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,104,203 | 0 | A | G | 100.0% | 44.4 / NA | 14 | T85A (ACA→GCA) | csgB | curlin, minor subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/8); total (6/8) | |||||||||||
CGGCAGGGAGGCTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGACAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGCCAGTATTTCGCAAGGTGCT > NC_000913/1104131‑1104274 | cGGCAGGGAGGCTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGAt < 1:222499/81‑1 (MQ=255) ggCAGGGAGGCTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGAt > 2:222530/1‑80 (MQ=255) cTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGc < 1:222500/81‑1 (MQ=255) aaaaCTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCat < 2:222501/80‑1 (MQ=255) aCTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCatatat < 2:222502/81‑1 (MQ=255) ttttGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATAtt > 1:222527/1‑80 (MQ=255) gCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAg > 1:222529/1‑81 (MQ=255) gttgttGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAGGCg < 1:222503/81‑1 (MQ=255) gcAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGc > 2:222521/1‑81 (MQ=255) aagaagGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCa < 2:222504/81‑1 (MQ=255) gaagGTAGTAGCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAAc < 2:222505/81‑1 (MQ=255) gtagCAACCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGcc < 2:222506/80‑1 (MQ=255) aaCCGGGCAAAGATTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGCCAGTAtt > 2:222524/1‑81 (MQ=255) aTTGACCAGGCAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGCCAGTATTTCGCAAGGTGCt > 1:222526/1‑81 (MQ=255) | CGGCAGGGAGGCTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGACAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGCCAGTATTTCGCAAGGTGCT > NC_000913/1104131‑1104274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |