| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,212,376 | G→A | intergenic (‑72/+164) | ymgK ← / ← ymgL | protein YmgK/protein YmgL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,212,376 | 0 | G | A | 100.0% | 18.9 / NA | 7 | intergenic (‑72/+164) | ymgK/ymgL | protein YmgK/protein YmgL |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (1/6); total (1/6) | |||||||||||
TTGCCTTTTTATATAACGATAATAATGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAGTTATATAGGAATGATTTAACCTGTTCCTGGCTAAAATACATATAACCGGATGATGACTAAA > NC_000913/1212310‑1212437 | ttGCCTTTTTATATAACGATAATAATGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAATTATATAGGAATGa < 1:240117/81‑1 (MQ=255) tataACGATAATAATGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAATTATATAGGAATGATTTAACCTGt < 1:240118/80‑1 (MQ=255) taataaTGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAATTATATAGGAATGATTTAACCTGTTCCTGGCTa < 1:240119/81‑1 (MQ=255) aataatGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAATTATATAGGAATGATTTAACCTGTTCCTGGCTa > 2:240128/1‑80 (MQ=255) atGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAATTATATAGGAATGATTTAACCTGTTCCTGGCTAAAAt < 1:240120/80‑1 (MQ=255) tgacatgaGAATAAGGTTTCAATTTTTGAATTATATAGGAATGATTTAACCTGTTCCTGGCTAAAATACATATAACCGgat < 1:240121/81‑1 (MQ=255) aTAAGGTTTCAATTTTTGAATTATATAGGAATGATTTAACCTGTTCCTGGCTAAAATACATATAACCGGATGATGACTaaa < 1:240122/81‑1 (MQ=255) | TTGCCTTTTTATATAACGATAATAATGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAGTTATATAGGAATGATTTAACCTGTTCCTGGCTAAAATACATATAACCGGATGATGACTAAA > NC_000913/1212310‑1212437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |