| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,426,461 | A→C | E3A (GAG→GCG) | ynaA → | Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,426,461 | 0 | A | C | 100.0% | 42.0 / NA | 14 | E3A (GAG→GCG) | ynaA | Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (8/6); total (8/6) | |||||||||||
CTATATCTACTATTATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAT > NC_000913/1426385‑1426535 | cTATATCTACTATTATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGCGCaa < 1:271792/81‑1 (MQ=255) tatCTACTATTATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGCGCAAAcc < 1:271793/81‑1 (MQ=255) tGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGc < 2:271794/80‑1 (MQ=255) cGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCaat > 2:271806/1‑80 (MQ=255) cgcgGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTg > 1:271811/1‑81 (MQ=255) cgGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGa < 2:271795/81‑1 (MQ=255) gTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGc > 1:271807/1‑81 (MQ=255) ttttttGTTGTCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGaaa > 2:271801/1‑80 (MQ=255) tgttgtCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaataa < 2:271796/80‑1 (MQ=255) gtCAGGAGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCt < 2:271797/80‑1 (MQ=255) aGTTTTAATAAATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATc > 1:940896/1‑81 (MQ=255) ataaATGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGAcctc > 1:271808/1‑81 (MQ=255) aaaTGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGAcctcct > 1:271813/1‑81 (MQ=255) tGGCAGCGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAt > 2:271809/1‑81 (MQ=255) | CTATATCTACTATTATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAT > NC_000913/1426385‑1426535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |