| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,498,595 | T→C | intergenic (+84/‑56) | opgD → / → ydcH | glucan biosynthesis protein D/protein YdcH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,498,595 | 0 | T | C | 100.0% | 52.0 / NA | 16 | intergenic (+84/‑56) | opgD/ydcH | glucan biosynthesis protein D/protein YdcH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/11); total (5/11) | |||||||||||
TCTTCGGCACCTTCTTCGGGAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGTAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTGCGTATGTTTCCAGAATACCG > NC_000913/1498520‑1498667 | tcttcGGCACCTTCTTCGGGAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATc < 1:282445/80‑1 (MQ=255) cACCTTCTTCGGGAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGgtg < 1:282446/81‑1 (MQ=255) gggAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTAttt > 2:282468/1‑78 (MQ=255) gAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGa > 2:282474/1‑80 (MQ=255) ccGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCt > 1:282473/1‑81 (MQ=255) gTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTg < 2:282447/81‑1 (MQ=255) gATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAg > 2:282472/1‑81 (MQ=255) tCCCGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAggg < 2:282448/81‑1 (MQ=255) ccGCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGa < 2:282449/80‑1 (MQ=255) gCTCGCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTg < 2:282450/81‑1 (MQ=255) gCATTTTTCCCTAAGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTGCGt < 1:282451/80‑1 (MQ=255) cccTAAGTTAAACGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTGCGTATGTTTcc < 2:282452/80‑1 (MQ=255) aaGTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTGCGTATGTTTCCAGaa > 2:282471/1‑80 (MQ=255) gTTAAATGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTGCGTATGTTTCCAGAATAc < 1:282453/81‑1 (MQ=255) aaaTGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCATCCACTCACAAAGAGTGCGTATTTTTCCAGAATACCg < 2:282454/80‑1 (MQ=255) aaaTGAGCAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTGCGTATGTTTCCAGAATACCg < 2:282455/80‑1 (MQ=255) | TCTTCGGCACCTTCTTCGGGAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAATGAGTAATCTGATGGTGTGTATTTCAGATACACCTTGTCAGCCACTAACAGGGAGTGCGTATGTTTCCAGAATACCG > NC_000913/1498520‑1498667 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |