| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,508,541 | T→A | N587K (AAT→AAA) | rlhA → | 23S rRNA 5‑hydroxycytidine C2501 synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,508,541 | 0 | T | A | 100.0% | 67.6 / NA | 20 | N587K (AAT→AAA) | rlhA | 23S rRNA 5‑hydroxycytidine C2501 synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (12/8); total (12/8) | |||||||||||
GGCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAATATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCG > NC_000913/1508464‑1508615 | ggCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATc < 2:283900/81‑1 (MQ=255) gTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGc > 2:283930/1‑81 (MQ=255) tCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCt < 2:283901/81‑1 (MQ=255) cccGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTg > 2:283929/1‑81 (MQ=255) aCCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGcc < 2:283903/80‑1 (MQ=255) aCCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGcc < 1:283902/80‑1 (MQ=255) aTTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAAc > 2:283937/1‑81 (MQ=255) tttGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGc > 2:283942/1‑81 (MQ=255) ccTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATg < 2:283904/81‑1 (MQ=255) ttAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAg > 1:283926/1‑81 (MQ=255) tAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAg > 1:283939/1‑80 (MQ=255) gAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTa > 1:283945/1‑79 (MQ=255) cAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGttt < 1:283905/81‑1 (MQ=255) cAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGttt < 1:283906/81‑1 (MQ=255) cGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGAtt > 2:283947/1‑81 (MQ=255) cGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGAtt < 2:283907/81‑1 (MQ=255) gAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTg > 2:283933/1‑81 (MQ=255) gAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTg > 2:283908/1‑81 (MQ=255) aaGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTgcc > 2:283944/1‑81 (MQ=255) aGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTgccg > 2:283938/1‑81 (MQ=255) | GGCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAATATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCG > NC_000913/1508464‑1508615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |