| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,520,982 | A→G | I695T (ATT→ACT) | yncD ← | putative TonB‑dependent outer membrane receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,520,982 | 0 | A | G | 100.0% | 63.0 / NA | 19 | I695T (ATT→ACT) | yncD | putative TonB‑dependent outer membrane receptor |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (13/6); total (13/6) | |||||||||||
TTATACCAGCAATACAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAATATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAA > NC_000913/1520904‑1521059 | ttATACCAGCAATACAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAgta > 2:285741/1‑81 (MQ=255) aCCAGCAATACAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCa > 1:285743/1‑81 (MQ=255) ccAGCAATACAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCa < 1:285719/80‑1 (MQ=255) ccAGCAATACAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCAt < 1:285718/81‑1 (MQ=255) cAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGacac > 2:285751/1‑80 (MQ=255) cAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGacac > 2:285739/1‑80 (MQ=255) cGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATaa > 2:285744/1‑81 (MQ=255) ttAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAAtt > 1:285737/1‑81 (MQ=255) aaaTGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCg > 2:285736/1‑81 (MQ=255) cGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAg > 1:285750/1‑81 (MQ=255) ggCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAgg > 1:285742/1‑81 (MQ=255) tACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGt > 1:285740/1‑80 (MQ=255) ggCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATc < 2:285720/81‑1 (MQ=255) gCATCAAGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCg > 1:285738/1‑81 (MQ=255) aaGGTAATTACTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGt > 2:285747/1‑81 (MQ=255) aCTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCa < 2:285721/80‑1 (MQ=255) aCTCAAATCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCAt > 2:285749/1‑81 (MQ=255) aaTCTCCACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGAc > 1:285748/1‑80 (MQ=255) cACGCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAAt < 2:285722/77‑1 (MQ=255) gCAGTATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGaa < 1:285723/81‑1 (MQ=255) | TTATACCAGCAATACAATCGTTAAAGTAAATGCCCGGCAAATACCGGGCATCAAGGTAATTACTCAAATCTCCACGCAATATTCATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAA > NC_000913/1520904‑1521059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |