| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,587,692 | G→A | L15F (CTT→TTT) | ydeQ ← | putative fimbrial adhesin protein YdeQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,587,692 | 0 | G | A | 100.0% | 35.1 / NA | 11 | L15F (CTT→TTT) | ydeQ | putative fimbrial adhesin protein YdeQ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/7); total (4/7) | |||||||||||
GGTTGTACCTGCTCCAATACTTGACCCGCCATCGACATTACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGAT > NC_000913/1587615‑1587760 | ggTTGTACCTGCTCCAATACTTGACCCGCCATCGACATTACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAAAt > 1:294886/1‑80 (MQ=255) cAATACTTGACCCGCCATCGACATTACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGa < 2:294870/81‑1 (MQ=255) aaTACTTGACCCGCCATCGACATTACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGAc < 2:294871/81‑1 (MQ=255) gACCCGCCATCGACATTACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGACCTTtat < 1:294872/80‑1 (MQ=255) aCATTACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGACCTTTATACTGATTGTTTTa > 1:294895/1‑81 (MQ=255) aaGGCAAAAACTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGatat < 1:294873/79‑1 (MQ=255) ggCAAAAACTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGATATATcc > 2:294899/1‑81 (MQ=255) gCAAAAACTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGATATATCCt < 1:294874/81‑1 (MQ=255) aaCTTTGCCTGCCATTAATAGAAAATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGATATATCCTAAGGt < 2:294875/81‑1 (MQ=255) tgcctgccATTAATAGAAAATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGATATATCCTAAGGTTaa < 2:294876/79‑1 (MQ=255) ccATTAATAGAAAATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGAt > 2:294877/1‑81 (MQ=255) | GGTTGTACCTGCTCCAATACTTGACCCGCCATCGACATTACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACAGGACCTTTATACTGATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGAT > NC_000913/1587615‑1587760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |