| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,682,673 | A→G | E172G (GAA→GGA) | rstA → | DNA‑binding transcriptional regulator RstA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,682,673 | 0 | A | G | 100.0% | 55.5 / NA | 17 | E172G (GAA→GGA) | rstA | DNA‑binding transcriptional regulator RstA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (12/5); total (12/5) | |||||||||||
GATCCCATCAACCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGAATTAGCTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACG > NC_000913/1682597‑1682747 | gATCCCATCAACCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGAt > 2:307497/1‑79 (MQ=255) cATCAACCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTAc > 2:307499/1‑81 (MQ=255) aaCCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCAt < 2:307473/81‑1 (MQ=255) aaCCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCAt > 2:307495/1‑81 (MQ=255) aCCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATg > 1:307475/1‑81 (MQ=255) aCCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATg < 1:307474/81‑1 (MQ=255) cgTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCgg > 2:307508/1‑81 (MQ=255) gTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCggg < 1:307476/81‑1 (MQ=255) gTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCggg > 2:307493/1‑81 (MQ=255) gTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCGGGCa > 2:307500/1‑80 (MQ=255) tGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCGGGCAAATCATg > 1:307506/1‑80 (MQ=255) tAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCGGGCAAATCATGGACcg > 1:307498/1‑81 (MQ=255) aaCACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCGGGCAAATCATGGACcgc > 1:307511/1‑81 (MQ=255) acacTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGGATTAGCTACCCATGCCGGGCAAATCATGGACcgc < 2:307477/80‑1 (MQ=255) aTTTCGAATTATTGTGGGGATTAGCTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACgcggc < 2:307478/80‑1 (MQ=255) cGAATTATTGTGGGGATTAGCTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAg > 2:307515/1‑81 (MQ=255) gtgGGGATTAGCTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACg > 2:307502/1‑80 (MQ=255) | GATCCCATCAACCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGAATTAGCTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACG > NC_000913/1682597‑1682747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |