| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,986,350 | T→C | intergenic (‑222/‑575) | araF ← / → ftnB | arabinose ABC transporter periplasmic binding protein/putative ferritin‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,986,350 | 0 | T | C | 100.0% | 48.3 / NA | 15 | intergenic (‑222/‑575) | araF/ftnB | arabinose ABC transporter periplasmic binding protein/putative ferritin‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/8); total (7/8) | |||||||||||
AGGAGAGCAATATCACATCGCAGAATTACAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAATTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACC > NC_000913/1986272‑1986426 | aGGAGAGCAATATCACATCGCAGAATTACAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAActt > 2:353867/1‑81 (MQ=255) gagaGCAATATCACATCGCAGAATTACAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGt > 1:353873/1‑81 (MQ=255) gCAATATCACATCGCAGAATTACAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGa < 1:353845/81‑1 (MQ=255) cAGAATTACAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATg < 2:353846/81‑1 (MQ=255) aaTTACAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGcac < 2:353847/81‑1 (MQ=255) cAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCAcagcag < 1:353848/81‑1 (MQ=255) cAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCAcagcag < 2:353849/81‑1 (MQ=255) gTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGAt > 2:353870/1‑81 (MQ=255) tGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCAt > 1:353889/1‑80 (MQ=255) cATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAg < 2:353850/81‑1 (MQ=255) gAAAAGACATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAAt > 1:353879/1‑81 (MQ=255) aCATAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAATCCttgt < 2:353851/81‑1 (MQ=255) aTAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAATCCttgttg > 2:353877/1‑81 (MQ=255) aTAAGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAATCCttgttg > 2:353880/1‑81 (MQ=255) aaGGGAAAGCCAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTc > 1:353875/1‑81 (MQ=255) ccAACTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTAcc < 2:353852/81‑1 (MQ=255) | AGGAGAGCAATATCACATCGCAGAATTACAGTGAGAACGTGCATAAATTTAGCGGGAAAAGACATAAGGGAAAGCCAATTTGTCAGACAAATTGTCGAATGCACAGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACC > NC_000913/1986272‑1986426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |