| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,005,669 | A→G | K123E (AAA→GAA) | fliS → | flagellar biosynthesis protein FliS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,005,669 | 0 | A | G | 100.0% | 52.0 / NA | 16 | K123E (AAA→GAA) | fliS | flagellar biosynthesis protein FliS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/7); total (9/7) | |||||||||||
AAGCCAATTTACGCAACGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGAAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGCATTTATATTTCGC > NC_000913/2005595‑2005741 | aaGCCAATTTACGCAACGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGGAAGAGt > 2:356822/1‑81 (MQ=255) aaTTTACGCAACGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGAGAAGAGTCGTTa > 1:356824/1‑81 (MQ=255) cGCAACGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACtctc < 2:356805/80‑1 (MQ=255) cGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCcttc < 1:356806/81‑1 (MQ=255) aTGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCcttctt > 2:356828/1‑81 (MQ=255) tGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCttt < 2:356807/81‑1 (MQ=255) gaagaaGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGAccc < 2:356808/80‑1 (MQ=255) ggAAGCATTAATGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCtgat > 2:356838/1‑80 (MQ=255) aaTGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGc < 1:356809/80‑1 (MQ=255) tGCGCAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCAcc < 2:356810/81‑1 (MQ=255) cgcAATATTGCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGc < 1:356811/81‑1 (MQ=255) ttGCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGCATTtata > 1:356839/1‑81 (MQ=255) gCCGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGCATTTATAtt > 1:356846/1‑81 (MQ=255) ccGATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGCATTTATAttt > 1:356834/1‑81 (MQ=255) gATGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGCATTTATATTTCg > 2:356833/1‑81 (MQ=255) aTGCCTGGGAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGCATTTATATTTCGc > 2:356841/1‑81 (MQ=255) | AAGCCAATTTACGCAACGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGAAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGATGAACCATGCACCGCATTTATATTTCGC > NC_000913/2005595‑2005741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |