| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,230,551 | T→C | intergenic (‑166/‑73) | dusC ← / → yohJ | tRNA‑dihydrouridine(16) synthase/PF03788 family membrane protein YohJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,230,551 | 0 | T | C | 100.0% | 65.7 / NA | 20 | intergenic (‑166/‑73) | dusC/yohJ | tRNA‑dihydrouridine(16) synthase/PF03788 family membrane protein YohJ |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/13); total (7/13) | |||||||||||
CTCTCTATGCTTGATGTATGCCTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGATTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCCATCTCATCTGGGGTGTTGATTATG > NC_000913/2230478‑2230626 | ctctctATGCTTGATGTATGCCTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTaa < 1:394643/81‑1 (MQ=255) tctATGCTTGATGTATGCCTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAAtgt > 2:394683/1‑81 (MQ=255) aTGTATGCCTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGc < 2:394644/81‑1 (MQ=255) tATGCCTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACg < 2:394645/81‑1 (MQ=255) aTGCCTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGt > 1:394689/1‑81 (MQ=255) ccTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGttt < 2:394646/80‑1 (MQ=255) gAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTAc > 1:394676/1‑80 (MQ=255) aGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTAc < 1:394647/79‑1 (MQ=255) ttCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGaat < 2:394648/81‑1 (MQ=255) cGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGaatt < 1:394649/80‑1 (MQ=255) gCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTatgat > 1:394678/1‑80 (MQ=255) gTAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGaa < 2:394650/81‑1 (MQ=255) tAATGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAAt < 1:394651/81‑1 (MQ=255) aTGCCGGGGAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATc < 1:394652/80‑1 (MQ=255) gggAGCGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCcatctca < 2:394653/81‑1 (MQ=255) cGAAAAAATAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCCATCTCATCTgg < 2:394654/81‑1 (MQ=255) aaaaTAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCCATCTCATCTGGGgtg > 1:394684/1‑81 (MQ=255) aaaaTAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCCATCTCATCTGGGgtg > 2:394682/1‑81 (MQ=255) aaTAAGCGCTGACTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCCATCTCATCTGGGGTGtt > 2:394677/1‑81 (MQ=255) gcTGACTTCTTCATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCCATCTCATCTGGGGTGTTGATTATg < 2:394655/81‑1 (MQ=255) | CTCTCTATGCTTGATGTATGCCTGAGTTCGCTGCGCATTGCGTAATGCCGGGGAGCGAAAAAATAAGCGCTGATTTCTTAATGTGATCGGTAGCACGTTTTACGAATTAATTGTATGATGAATCCATCTCATCTGGGGTGTTGATTATG > NC_000913/2230478‑2230626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |