| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,496,582 | T→C | intergenic (+17/‑339) | lpxP → / → ypdK | palmitoleoyl acyltransferase/putative membrane protein YpdK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,496,582 | 0 | T | C | 100.0% | 55.9 / NA | 17 | intergenic (+17/‑339) | lpxP/ypdK | palmitoleoyl acyltransferase/putative membrane protein YpdK |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/11); total (6/11) | |||||||||||
ATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAA > NC_000913/2496512‑2496656 | aTCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTTCcctcct > 1:443109/1‑80 (MQ=255) ccGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTACCCTCCTCAAATc < 1:443076/81‑1 (MQ=255) aaCGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAAc < 1:443077/81‑1 (MQ=255) aCGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAAcc < 2:443078/81‑1 (MQ=255) cgcgCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCt < 2:443079/81‑1 (MQ=255) cgcCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCa < 1:443080/81‑1 (MQ=255) cGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGt < 2:443081/81‑1 (MQ=255) ggTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGtt > 1:443108/1‑81 (MQ=255) gtcgtTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCtttt < 1:443082/81‑1 (MQ=255) gtTGTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTc > 2:443106/1‑81 (MQ=255) gTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCtt > 2:443112/1‑80 (MQ=255) gTACATTTAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCtt < 1:443083/80‑1 (MQ=255) ttAACAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGttt > 1:443128/1‑81 (MQ=255) aCAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGttttt < 1:443084/80‑1 (MQ=255) cAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTc < 2:443085/81‑1 (MQ=255) cAAACTGCTCTTACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTc < 2:443086/81‑1 (MQ=255) tACTCCTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGaa > 2:443111/1‑80 (MQ=255) | ATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAACAAACTGCTCTTACTCTTTCCCTCCTCAAATCGGCCATAATAACCTCATGGTTTTTATGGCTTTTTTCTTAAGGTTTTTTCCTTCGCTGAA > NC_000913/2496512‑2496656 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |