| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,498,376 | T→C | intergenic (‑81/‑295) | alaC ← / → ypdA | glutamate‑‑pyruvate aminotransferase AlaC/sensory histidine kinase YpdA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,498,376 | 0 | T | C | 100.0% | 49.4 / NA | 16 | intergenic (‑81/‑295) | alaC/ypdA | glutamate‑‑pyruvate aminotransferase AlaC/sensory histidine kinase YpdA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/10); total (6/10) | |||||||||||
CTCAGATTAACGTTAGCGCCCGGACCGTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATTAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAATGACGTTAAATGAGGAACTCTGCTTTAAAAACAGG > NC_000913/2498302‑2498449 | cTCAGATTAACGTTAGCGCCCGGACCGTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTtc > 1:443409/1‑81 (MQ=255) aCGTTAGCGCCCGGACCGTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTcc < 2:443389/81‑1 (MQ=255) gcCCGGACCGTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGtttt < 2:443390/81‑1 (MQ=255) cGGACCGTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAg > 2:443444/1‑80 (MQ=255) ggACCGTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGaa < 2:443391/81‑1 (MQ=255) gTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACAttt < 1:443392/81‑1 (MQ=255) tCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACAtttt < 1:443394/81‑1 (MQ=255) tCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACAtttt < 2:443393/81‑1 (MQ=255) gCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTaa > 1:443423/1‑81 (MQ=255) gACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAAt > 1:443416/1‑80 (MQ=255) ccACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAATGACGtt < 1:443395/79‑1 (MQ=255) ccACGATGGTGGCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAATGACGTTa < 1:443396/80‑1 (MQ=255) ggtggCTGTTTTGAAAATAGCCTGAACAATTTCTGTCTGTGCAGCGTTTTAGAACATTTTATTAATGACGTTAAATGAgg > 2:443418/1‑80 (MQ=255) gtggCTGTTTTGAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAATGACGTTAAATGAGGaa > 1:443427/1‑81 (MQ=255) gAAAATAGCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAATGACGTTAAATGAGGAACTCTGCTTTa < 1:443397/80‑1 (MQ=255) gCCTGATCAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAATGACGTTAAATGAGGAACTCTGCTTTAAAAACAgg < 2:443398/81‑1 (MQ=255) | CTCAGATTAACGTTAGCGCCCGGACCGTCCGAGCGACGCTGCCACGATGGTGGCTGTTTTGAAAATAGCCTGATTAATTTCTGTCTGTCCAGCGTTTTAGAACATTTTATTAATGACGTTAAATGAGGAACTCTGCTTTAAAAACAGG > NC_000913/2498302‑2498449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |