| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,005,966 | G→A | intergenic (‑180/‑296) | ygeV ← / → ygeW | putative sigma(54)‑dependent transcriptional regulator YgeV/putative carbamoyltransferase YgeW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,005,966 | 0 | G | A | 100.0% | 56.9 / NA | 17 | intergenic (‑180/‑296) | ygeV/ygeW | putative sigma(54)‑dependent transcriptional regulator YgeV/putative carbamoyltransferase YgeW |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (8/9); total (8/9) | |||||||||||
TAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAA > NC_000913/3005890‑3006033 | tAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGtt < 2:548710/81‑1 (MQ=255) aaGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGtt > 2:548738/1‑80 (MQ=255) gATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTAt < 1:548711/81‑1 (MQ=255) aTTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTg > 1:548731/1‑78 (MQ=255) ttCTAATGAAATTATGGAAGAGATATCACATTTCTATATCTATATGAGAATTACGGCGGTAAGTTTATCAAACTGAaga > 1:548739/1‑79 (MQ=255) tCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAagaga < 2:548712/80‑1 (MQ=255) ttATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGcc < 2:548713/81‑1 (MQ=255) tGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCt > 1:548735/1‑81 (MQ=255) tGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCt > 1:548737/1‑81 (MQ=255) gagaTATCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATc > 1:548732/1‑81 (MQ=255) tCACATTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTAtt < 2:548714/80‑1 (MQ=255) acaTTTCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTc < 2:548715/80‑1 (MQ=255) tttCTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGAt < 1:548716/81‑1 (MQ=255) cTATATCAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATAc < 1:548717/80‑1 (MQ=255) cAATATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTagcag > 2:548741/1‑81 (MQ=255) aaTATGAGAATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTagcag > 1:548736/1‑80 (MQ=255) gaATTACGGCGGTAAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCaaataaa < 1:548718/81‑1 (MQ=255) | TAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAA > NC_000913/3005890‑3006033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |