| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,077,875 | C→T | A329T (GCT→ACT) | cmtA ← | mannitol‑specific PTS enzyme IICB component CmtA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,077,875 | 0 | C | T | 100.0% | 62.1 / NA | 18 | A329T (GCT→ACT) | cmtA | mannitol‑specific PTS enzyme IICB component CmtA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/13); total (5/13) | |||||||||||
GCTGACTGAGCAAACTCATCTTCGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGCAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGCCTTTCGGCGTCAGTGCCAGGTA > NC_000913/3077802‑3077950 | gCTGACTGAGCAAACTCATCTTCGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGa < 1:565781/80‑1 (MQ=255) aGCAAACTCATCTTCGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAggg > 1:565817/1‑80 (MQ=255) aTCTTCGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGt < 1:565783/81‑1 (MQ=255) aTCTTCGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGt < 2:565782/81‑1 (MQ=255) tCTTCGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGt > 1:565836/1‑80 (MQ=255) cGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAacac > 1:565829/1‑81 (MQ=255) cGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAaca < 2:565784/80‑1 (MQ=255) gCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAACAcc < 2:565785/81‑1 (MQ=255) cGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCa < 1:565786/79‑1 (MQ=255) aCCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGcc < 1:565787/81‑1 (MQ=255) ttttCCATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGaa < 1:565788/80‑1 (MQ=255) cATCTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGcc < 2:565789/81‑1 (MQ=255) cTTCAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGCCttt > 1:565832/1‑81 (MQ=255) cAGTATCGGCGAAGTAATAGTAAAGAACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGCCTTTc < 1:565790/79‑1 (MQ=255) cAGTATCAGCGAAGTAATAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGCCTTTCgg > 2:565833/1‑81 (MQ=255) aGTATCAGCGAAGTAATAGTAAAGGACACCAGAGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGTGCCTTTCGGc < 2:565791/81‑1 (MQ=255) aGTAATAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGCCTTTCGGCGTCAGTGCCAg < 1:565792/81‑1 (MQ=255) aTAGTAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGCCTTTCGGCGTCAGTGCCAGGTa < 1:565793/80‑1 (MQ=255) | GCTGACTGAGCAAACTCATCTTCGCTCTCCGTTTCCACCGTTTTTTCCATCTTCAGTATCAGCGAAGTAATAGCAAAGGACACCAGGGTACCTACCGTAACACCGGCAATTGTCGCCAGGAACGAGCCTTTCGGCGTCAGTGCCAGGTA > NC_000913/3077802‑3077950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |