| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,632,970 | A→G | pseudogene (1489/1607 nt) | yhiL ← | putative uncharacterized protein YhiL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,632,970 | 0 | A | G | 100.0% | 47.8 / NA | 15 | pseudogene (1489/1607 nt) | yhiL | putative uncharacterized protein YhiL |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/9); total (6/9) | |||||||||||
TTTTTATCACGTGCTTCCTTCAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTACCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCTTTGAGTGTCTCCCCACAT > NC_000913/3632901‑3633044 | tttttATCACGTGCTTCCTTCAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCa < 1:704940/81‑1 (MQ=255)tttttATCACGTGCTTCCTTCAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCa > 2:704961/1‑81 (MQ=255) tttATCACGTGCTTCCTTCAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCat > 2:704950/1‑80 (MQ=255) aCGTGCTTCCTTCAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCATGATGcc > 2:704958/1‑80 (MQ=255) ccttcAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATAttt < 1:704941/79‑1 (MQ=255) tcAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTc > 2:704964/1‑81 (MQ=255) aaTTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATg > 2:704959/1‑80 (MQ=255) taCCATTATCAAATTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCtt < 2:704942/81‑1 (MQ=255) aTTATCAAATTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCAcc > 1:704960/1‑81 (MQ=255) ttATCAAATTGTTGATTATGATCTGCCCCGGGCGCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCt < 1:704943/81‑1 (MQ=255) aaaTTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCTTTGa < 2:704945/80‑1 (MQ=255) aaaTTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCTTTGAg < 1:704944/81‑1 (MQ=255) aaaTTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCTTTGAg < 2:704946/81‑1 (MQ=255) aaTTGTTGATTATGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCTTTGAgt < 1:704947/81‑1 (MQ=255) tGATCTGCCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCTTTGAGTATCTCCCCACat < 1:704948/81‑1 (MQ=255) | TTTTTATCACGTGCTTCCTTCAGGGAATTTAGCCCCATAATACCATTATCAAATTGTTGATTATGATCTACCCCGGGCCCATGATGCCCATATTTTTGTCTAATGTATTTGCTGGGGTCTTCACCTTTGAGTGTCTCCCCACAT > NC_000913/3632901‑3633044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |