| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,793,741 | A→G | intergenic (‑58/‑246) | htrL ← / → rfaD | protein HtrL/ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,793,741 | 0 | A | G | 100.0% | 48.3 / NA | 15 | intergenic (‑58/‑246) | htrL/rfaD | protein HtrL/ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/6); total (9/6) | |||||||||||
TGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACA > NC_000913/3793668‑3793816 | tggtggATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGt < 1:746071/80‑1 (MQ=255) atTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATcc < 2:746072/80‑1 (MQ=255) atTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCa < 1:746073/81‑1 (MQ=255) aTTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCa > 1:746083/1‑80 (MQ=255) aTTACTAATAAGACCAATAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCaa < 1:746074/81‑1 (MQ=255) aGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTccat < 1:746075/81‑3 (MQ=255) aaaaaaaGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACa > 1:746089/1‑81 (MQ=255) aaaaGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCg > 1:746097/1‑81 (MQ=255) ttATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATAtt < 1:746076/81‑1 (MQ=255) cATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACt > 2:746149/1‑81 (MQ=255) atatTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAg > 1:746081/1‑80 (MQ=255) aaTAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTAt > 1:746090/1‑81 (MQ=255) tAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTAtt > 1:746088/1‑80 (MQ=255) aGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTca > 2:746085/1‑81 (MQ=255) aaTGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTcaca > 1:746092/1‑81 (MQ=255) | TGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACA > NC_000913/3793668‑3793816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |