| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 417,022 | G→T | intergenic (‑70/‑120) | sbcD ← / → phoB | ATP dependent, structure specific DNA nuclease ‑ SbcD subunit/DNA‑binding transcriptional dual regulator PhoB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 417,022 | 0 | G | T | 100.0% | 81.5 / NA | 24 | intergenic (‑70/‑120) | sbcD/phoB | ATP dependent, structure specific DNA nuclease ‑ SbcD subunit/DNA‑binding transcriptional dual regulator PhoB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (11/13); total (11/13) | |||||||||||
GATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATG > NC_000913/416944‑417095 | gATGCGCATAACGGTTCCCTGGCGAAAAAGCGTGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTcc < 2:93776/81‑1 (MQ=255) tgagcATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCAc > 1:93813/4‑81 (MQ=255) gcgcATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACg > 2:93820/1‑81 (MQ=255) cgcATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACgg < 2:93777/81‑1 (MQ=255) aTAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGaaa > 2:93814/1‑81 (MQ=255) aTAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGaaa < 2:93778/81‑1 (MQ=255) aTAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGaaa > 1:93818/1‑81 (MQ=255) ttCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATaa > 1:93821/1‑81 (MQ=255) ggCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTg > 1:93822/1‑79 (MQ=255) gCGAAAAAGCATGGGCGCGATTATACGCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGaa < 1:93779/80‑1 (MQ=255) gAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGat < 1:93780/81‑1 (MQ=255) gAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGa > 2:93817/1‑80 (MQ=255) aaGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATAtgt < 2:93781/81‑1 (MQ=255) aGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATAtgtg > 2:93825/1‑81 (MQ=255) tGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATATGTGcgac < 2:93782/81‑1 (MQ=255) gATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCttt > 2:93816/1‑81 (MQ=255) gATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCttt < 1:93783/81‑1 (MQ=255) ccATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTtcataaatctgtcataaatct > 2:93827/1‑81 (MQ=255) cATTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTtcataaatctgtcataaatct > 1:93829/1‑80 (MQ=255) aTTTGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGa < 2:93784/81‑1 (MQ=255) tGCTTTTTTCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACg < 1:93785/80‑1 (MQ=255) cTTTTTTCTGCTCCACGGAAATCAATACCCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCAt < 2:93786/81‑1 (MQ=255) ttttCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATa < 1:93787/79‑1 (MQ=255) ttCTGCTCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATg < 2:93788/80‑1 (MQ=255) | GATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATG > NC_000913/416944‑417095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |