| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,525,883 | G→A | intergenic (‑80/+223) | yjhI ← / ← sgcR | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhI/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator SgcR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,525,883 | 0 | G | A | 100.0% | 72.2 / NA | 21 | intergenic (‑80/+223) | yjhI/sgcR | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhI/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator SgcR |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/10); total (11/10) | |||||||||||
CTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAAT > NC_000913/4525809‑4525960 | ctcctcCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAatga > 1:938069/1‑81 (MQ=255)ctcctcCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAatga < 2:938035/81‑1 (MQ=255) gCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTa < 2:938036/80‑1 (MQ=255) cATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAAtg > 2:938067/1‑81 (MQ=255) cATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAAtg > 1:938068/1‑81 (MQ=255) aTAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCt < 1:938037/81‑1 (MQ=255) aTAAATGGTATCGACATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAACTGTGATCt < 2:938038/81‑1 (MQ=255) tAAATGGTATCGGCATTACATAGTGGAAAATGTGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCtt < 2:938039/81‑1 (MQ=255) gTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTaca > 2:938072/1‑80 (MQ=255) tCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACt < 1:938040/81‑1 (MQ=255) cGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACtt > 2:938076/1‑81 (MQ=255) ggCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACtt < 2:938041/80‑1 (MQ=255) cATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTg > 1:938079/1‑80 (MQ=255) tAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATg > 2:938081/1‑80 (MQ=255) aGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGaa > 2:938073/1‑81 (MQ=255) gTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAAt < 1:938042/81‑1 (MQ=255) ggAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATc > 2:938075/1‑80 (MQ=255) aGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGt < 1:938043/81‑1 (MQ=255) aTGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGaa > 2:938078/1‑81 (MQ=255) tGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAAt > 2:938084/1‑78 (MQ=255) aCCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAAt < 2:938044/81‑1 (MQ=255) | CTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAAT > NC_000913/4525809‑4525960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |