| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 577,009 | A→G | intergenic (‑184/‑389) | nmpC ← / → essD | DLP12 prophage; putative outer membrane porin NmpC/DLP12 prophage; putative phage lysis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 577,009 | 0 | A | G | 100.0% | 59.2 / NA | 18 | intergenic (‑184/‑389) | nmpC/essD | DLP12 prophage; putative outer membrane porin NmpC/DLP12 prophage; putative phage lysis protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/10); total (8/10) | |||||||||||
TGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAA > NC_000913/576936‑577081 | tgtgAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATc < 1:126577/80‑1 (MQ=255) tAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGcc < 1:126578/81‑1 (MQ=255) aTCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAAt > 2:126600/1‑81 (MQ=255) tATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAAtt < 1:126579/77‑1 (MQ=255) aTTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTatat > 2:126591/1‑81 (MQ=255) tttttATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTtat < 1:126580/78‑1 (MQ=255) aTCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACg < 1:126581/80‑1 (MQ=255) tGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTg > 1:126592/1‑81 (MQ=255) gAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGACAATTTATATTAACGGCTGt > 2:126595/1‑81 (MQ=255) gAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGct < 1:126582/80‑1 (MQ=255) aaTCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGctc > 1:126608/1‑80 (MQ=255) tCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCtat < 1:126583/81‑1 (MQ=255) tGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAg < 1:126584/81‑1 (MQ=255) gCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGt < 2:126585/81‑1 (MQ=255) ctTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTc > 2:126598/1‑80 (MQ=255) gCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAAtt < 1:126586/80‑1 (MQ=255) gCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAAtt > 2:126597/1‑80 (MQ=255) gAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTaaa > 1:126596/1‑81 (MQ=255) | TGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAA > NC_000913/576936‑577081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |