| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,887,571 | Δ1 bp | intergenic (+163/+7) | sokX → / ← cysH | small RNA SokX/phosphoadenosine phosphosulfate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,887,570 | 0 | G | . | 100.0% | 57.9 / NA | 14 | intergenic (+162/+8) | sokX/cysH | small RNA SokX/phosphoadenosine phosphosulfate reductase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (7/7); total (7/7) | |||||||||||
TTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATG > NC_000913/2887498‑2887641 | tttAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATAttt < 1:485009/81‑1 (MQ=255) ttAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTa > 1:485025/1‑81 (MQ=255) aaTGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCgtgt > 2:485026/1‑80 (MQ=255) aTGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTaa > 2:485029/1‑81 (MQ=255) aTGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTaa > 2:485032/1‑81 (MQ=255) ctCGCAAAATAAAAACGCCCCCATCATTTCTGACTGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCcaca < 1:485010/81‑1 (MQ=255) cGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACAtt > 2:485036/1‑81 (MQ=255) aaaaTAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACATTccc < 1:485011/81‑1 (MQ=255) tAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACATTCCCtttt < 1:485012/81‑1 (MQ=255) aaaaaCGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACATTCCCtttt > 1:485035/1‑80 (MQ=255) tttCTGACAGAGGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAAcgcg < 1:485013/81‑1 (MQ=255) agGCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTttcttcttc < 2:485014/81‑1 (MQ=255) gCGTTTAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCg < 1:485015/81‑1 (MQ=255) tAATTTGTCC‑GCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATg > 2:485033/1‑81 (MQ=255) | TTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATG > NC_000913/2887498‑2887641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |