| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,667,617 | (A)6→5 | intergenic (‑37/+174) | gadA ← / ← ccp | glutamate decarboxylase A/cytochrome c peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,667,612 | 0 | A | . | 100.0% | 77.6 / NA | 18 | intergenic (‑32/+179) | gadA/ccp | glutamate decarboxylase A/cytochrome c peroxidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (6/12); total (6/12) | |||||||||||
GTGAATCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATAAAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAGAAAA > NC_000913/3667532‑3667687 | gTGAATCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATa < 1:655115/81‑1 (MQ=255) gtTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGAtt > 2:655144/1‑81 (MQ=255) cTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTAt > 1:655143/1‑81 (MQ=255) aGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATcc < 1:655116/80‑1 (MQ=255) aGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATc < 2:655118/79‑1 (MQ=255) aGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATc < 2:655117/79‑1 (MQ=255) gccgAAATCCGTTAACAGCATCTGGTCCATTTCGAGCTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGGAGGATTTATCCGc < 2:655119/78‑1 (MQ=255) ggAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCaa > 2:655149/1‑81 (MQ=255) ggAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCaa > 1:655146/1‑81 (MQ=255) aGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAGAGTAGGATTTATCCGCAATGGAAGCAAGGCAt < 2:655120/81‑1 (MQ=255) gCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCAtt < 1:655121/81‑1 (MQ=255) tCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCtt < 2:655122/81‑1 (MQ=255) aaTTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATc > 1:655151/1‑81 (MQ=255) aaTTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATc < 1:655124/81‑1 (MQ=255) aaTTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATc < 1:655123/81‑1 (MQ=255) tttGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAg > 1:655145/1‑80 (MQ=255) tttGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGc < 1:655126/81‑1 (MQ=255) tttGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGc < 1:655125/81‑1 (MQ=255) ggCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAGaaaa < 2:655127/81‑1 (MQ=255) | GTGAATCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATAAAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAGAAAA > NC_000913/3667532‑3667687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |