Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,107,517 | A→T | D271E (GAT→GAA) | glf ← | UDP‑galactopyranose mutase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,107,517 | 0 | A | T | 100.0% | 41.7 / NA | 12 | D271E (GAT→GAA) | glf | UDP‑galactopyranose mutase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (8/4); total (8/4) |
CGTATGCTTTGTCTCAACATAGTCAAAATGTTTATGCTCAATTATTCTGGTATATGGTACATTAGCATCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTCCGTCTCAAATTTTA > NC_000913/2107451‑2107584 | cGTATGCTTTGTCTCAACATAGTCAAAATGTTTATGCTCAATTATTCTGGTATATGGTACATTAGCTTCAGTGAAATttat < 2:345459/81‑1 (MQ=255) tCAAAATGTTTATGCTCAATTATTCTGGTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGttt < 1:345460/81‑1 (MQ=255) gTTTATGCTCAATTATTCTGGTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAAtt > 2:345483/1‑81 (MQ=255) tttATGCTCAATTATTCTGGTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAAtt > 1:345478/1‑80 (MQ=255) cTCAATTATTCTGGTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCg > 2:345481/1‑81 (MQ=255) aaTTATTCTGGTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGtt < 1:345461/80‑1 (MQ=255) attattCTGGTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTcc < 2:345462/81‑1 (MQ=255) tattCTGGTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTCCGt > 2:345482/1‑81 (MQ=255) ggTATATGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTCCGTCTCaaa > 1:345485/1‑81 (MQ=255) atatGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTCCGTCTCAAAttt > 1:345476/1‑81 (MQ=255) tGGTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTCCGTCTCAAATTTTa > 2:345477/1‑80 (MQ=255) gTACATTAGCTTCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTCCGTCTCAAATTTTa > 1:345500/1‑78 (MQ=255) | CGTATGCTTTGTCTCAACATAGTCAAAATGTTTATGCTCAATTATTCTGGTATATGGTACATTAGCATCAGTGAAATTTATTACTGCATTCCCTTGGAAGTTTGGAAATTCATGGCGTTCCGTCTCAAATTTTA > NC_000913/2107451‑2107584 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |