| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,221,701 | T→C | M97V (ATG→GTG) | bglX ← | beta‑D‑glucoside glucohydrolase, periplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,221,701 | 0 | T | C | 100.0% | 50.2 / NA | 15 | M97V (ATG→GTG) | bglX | beta‑D‑glucoside glucohydrolase, periplasmic |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/7); total (8/7) | |||||||||||
GGAACACCGTGCGCTGACCGTGCAGCACGTCGTAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCATCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGCCCCAACCTGACCGTCTTTGATC > NC_000913/2221629‑2221777 | ggAACACCGTGCGCTGACCGTGCAGCACGTCGTAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGAt > 1:363721/1‑81 (MQ=255) aaCACCGTGCGCTGACCGTGCAGCACGTCGTAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATcc < 2:363687/81‑1 (MQ=255) aCCGTGCAGCACGTCGTAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGat < 2:363688/81‑1 (MQ=255) cGTGCAGCACGTCGTAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGatat < 2:363689/81‑1 (MQ=255) aCGTCGTAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACgg > 1:363719/1‑81 (MQ=255) gtcgtAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGt > 1:363724/1‑81 (MQ=255) gtAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTa < 2:363690/80‑1 (MQ=255) gtAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTAc > 1:363720/1‑81 (MQ=255) aGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGgt > 2:363716/1‑81 (MQ=255) aaagaaaagaGGAATTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGtt > 1:363722/1‑81 (MQ=255) aaTTTTCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGcccc < 2:363691/81‑1 (MQ=255) tCAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGCCCCAACCt > 1:363731/1‑81 (MQ=255) cAGGCGGCTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGCCCCAACCt > 2:363725/1‑80 (MQ=255) cTTAATTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGCCCCAACCTGACCGTCt < 1:363692/81‑1 (MQ=255) aaTTCCACCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGCCCCAACCTGACCGTCttt < 2:363693/80‑1 (MQ=255) ccaccaCCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGCCCCAACCTGACCGTCTTTGatc < 2:363694/80‑1 (MQ=255) | GGAACACCGTGCGCTGACCGTGCAGCACGTCGTAAGCAAAGAAAAGAGGAATTTTCAGGCGGCTTAATTCCATCACCTGATCCTGCATGGCGCGGATATCCTGACGGGTTACGGTGTTGAAAATCGCCCCAACCTGACCGTCTTTGATC > NC_000913/2221629‑2221777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |