| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,190,185 | T→C | L102P (CTT→CCT) | yqiH → | putative fimbrial chaperone YqiH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,190,185 | 0 | T | C | 100.0% | 47.5 / NA | 14 | L102P (CTT→CCT) | yqiH | putative fimbrial chaperone YqiH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/8); total (6/8) | |||||||||||
TGTTCCTCCAATGGTGCGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGC > NC_000913/3190108‑3190262 | tGTTCCTCCAATGGTGCGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTcc > 2:546791/1‑81 (MQ=255) ttCCTCCAATGGTGCGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTa < 1:546767/81‑1 (MQ=255) ctccAATGGTGCGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAg < 1:546768/81‑1 (MQ=255) cGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAAc < 2:546769/80‑1 (MQ=255) tAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAACGctc < 1:546770/80‑1 (MQ=255) tCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTa < 2:546771/81‑1 (MQ=255) gTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTa < 1:546772/81‑1 (MQ=255) aaTTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGc > 1:546795/1‑80 (MQ=255) aaaTAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGaaa > 1:546793/1‑81 (MQ=255) aaaTAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGaaa > 2:546797/1‑81 (MQ=255) aaTAAGAATGATAACTCAGGAAAAAATTGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAAt < 1:546773/81‑1 (MQ=255) ttGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAAtg > 1:546796/1‑81 (MQ=255) tGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAAtgt > 1:546794/1‑81 (MQ=255) aaCCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGc < 1:546774/81‑1 (MQ=255) | TGTTCCTCCAATGGTGCGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGC > NC_000913/3190108‑3190262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |