| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,267,297 | A→C | intergenic (‑232/‑83) | tdcA ← / → tdcR | DNA‑binding transcriptional activator TdcA/DNA‑binding transcriptional activator TdcR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,267,297 | 0 | A | C | 100.0% | 39.7 / NA | 12 | intergenic (‑232/‑83) | tdcA/tdcR | DNA‑binding transcriptional activator TdcA/DNA‑binding transcriptional activator TdcR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (5/7); total (5/7) | |||||||||||
TCAGCATAAACCCTGATTTTTGTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTATGTGGTTAATACAAAAAAGGGGCTGAGACCATATTTCAAGCAATTACCGGATAATTACCAGGCAAAATTTGAGTTAA > NC_000913/3267223‑3267374 | tCAGCATAAACCCTGATTTTTGTCAAAAAAAATGACGGGGATAACCATATTTTATAGCGATAACATCATTCGTTCTGTGGt > 2:563884/1‑81 (MQ=255) aGCATAAACCCTGATTTTTGTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTCTGTGGtt < 2:563864/80‑1 (MQ=255) aTAAACCCTGATTTTTGTCAAAAAAAATGACGGGGATAACCATATTTTATAGCGATAACATCATTCGTTCTGTGGTTAATa > 1:563886/1‑81 (MQ=255) aaaCCCTGATTTTTGTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTCTGTGGTTAATAc > 2:563878/1‑80 (MQ=255) tttGTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTCTGTGGTTAATACAAAAAAGGGGc < 1:563865/80‑1 (MQ=255) ttGTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTCTGTGGTTAATACAAAAAAGGGGCt < 2:563866/80‑1 (MQ=255) gTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTCTGTGGTTAATACAAAAAAGGGGCTga < 2:563867/80‑1 (MQ=255) gTCAAAAAAAATGACGGGGATAACCATATTTTATAGCGATAACATCATTCGTTCTGTGGTTAATACAAAAAAGGGGCt > 2:563885/1‑78 (MQ=255) aCCATATTTTATAGCGATAACATCATTCGTTCTGTGGTTAATACAAAAAAGGGGCTGAGACCATATTTCAAGCAATTAcc < 1:563868/80‑1 (MQ=255) aCATCATTCGTTCTGTGGTTAATACAAAAAAGGGGCTGAGACCATATTTCAAGCAATTACCGGATAATTACCAGGCaaaa < 1:563869/80‑1 (MQ=255) gTTCTGTGGTTAATACAAAAAAGGGGCTGAGACCATATTTCAAGCAATTACCGGATAATTACCAGGCAAAATTTGAGTTaa < 2:563870/81‑1 (MQ=255) gTTCTGTGGTTAATACAAAAAAGGGGCTGAGACCATATTTCAAGCAATTACCGGATAATTACCAGGCAAAATTTGAGTTa > 1:563894/1‑80 (MQ=255) | TCAGCATAAACCCTGATTTTTGTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTATGTGGTTAATACAAAAAAGGGGCTGAGACCATATTTCAAGCAATTACCGGATAATTACCAGGCAAAATTTGAGTTAA > NC_000913/3267223‑3267374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |