| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,282,453 | T→C | N208S (AAT→AGT) | yjcF ← | pentapeptide repeat‑containing protein YjcF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,282,453 | 0 | T | C | 100.0% | 63.4 / NA | 18 | N208S (AAT→AGT) | yjcF | pentapeptide repeat‑containing protein YjcF |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/11); total (7/11) | |||||||||||
TGTTGCATTGTAGAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAATTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGCGAAATTAAAATTCGTTTTATACATAT > NC_000913/4282377‑4282528 | tgttgCATTGTAGAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAActt > 1:804483/1‑79 (MQ=255) gCATTGTAGAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTc < 2:804459/80‑1 (MQ=255) gCATTGTAGAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCa > 1:804476/1‑81 (MQ=255) ttGTAGAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATc > 1:804482/1‑80 (MQ=255) gTAGAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATc > 1:804479/1‑78 (MQ=255) gAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGaa > 1:804497/1‑80 (MQ=255) cATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCaaa < 2:804460/81‑1 (MQ=255) gCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGt < 1:804461/81‑1 (MQ=255) aTGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTAtttttt > 2:804480/1‑81 (MQ=255) aTGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTAtttttt < 2:804462/81‑1 (MQ=255) aaTTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTcc < 1:804463/80‑1 (MQ=255) aaTTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTcc < 1:804464/80‑1 (MQ=255) tttAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCAtt < 1:804465/81‑1 (MQ=255) agTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGc > 2:804487/1‑81 (MQ=255) agTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGc < 2:804467/81‑1 (MQ=255) agTTCCGTCAGTCATTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGc < 1:804466/81‑1 (MQ=255) agtcaTTTTTATCTGAGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGCGAAATTaaa < 2:804468/81‑1 (MQ=255) aGCGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGCGAAATTAAAATTCGTTTTATACa > 1:804485/1‑80 (MQ=255) cGAAACTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGCGAAATTAAAATTCGTTTTATACatat < 2:804469/81‑1 (MQ=255) | TGTTGCATTGTAGAATTGAACATGCATAGCGGAACATGAATTTAGAGTTCCGTCAGTCATTTTTATCTGAGCGAAATTTGAGTCATCGAGAATACAATTATCAAAAAGTATTTTTTCCATTATGGCGAAATTAAAATTCGTTTTATACATAT > NC_000913/4282377‑4282528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |