| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 432,294 | A→G | intergenic (‑281/+18) | tsx ← / ← yajI | nucleoside‑specific channel‑forming protein Tsx/putative lipoprotein YajI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 432,294 | 0 | A | G | 100.0% | 55.1 / NA | 16 | intergenic (‑281/+18) | tsx/yajI | nucleoside‑specific channel‑forming protein Tsx/putative lipoprotein YajI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/10); total (6/10) | |||||||||||
TTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCA > NC_000913/432216‑432364 | ttgCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGAt < 1:88379/81‑1 (MQ=255) aaaCTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTc < 1:88381/81‑1 (MQ=255) tCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGtt < 2:88382/81‑1 (MQ=255) aaTCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTa < 2:88383/81‑1 (MQ=255) tCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACt > 2:88419/1‑81 (MQ=255) aGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCa > 2:88407/1‑81 (MQ=255) ggTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCAt < 1:88384/81‑1 (MQ=255) gTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCAt > 1:88403/1‑80 (MQ=255) aaCAAAATGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGt > 1:88408/1‑81 (MQ=255) aaaTGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGAt < 1:88385/81‑1 (MQ=255) aTGACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATAc < 1:88386/81‑1 (MQ=255) gACGGGGAAAGATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACg > 2:88416/1‑80 (MQ=255) gATGTTGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTa < 1:88387/81‑1 (MQ=255) ttGCGGGACGCACAAGATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACt < 1:88389/80‑1 (MQ=255) ttGCGGGACGCACAAGATCGTCCCGAAATACATTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTg < 2:88388/81‑1 (MQ=255) gACGCACAAGATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCca > 1:88428/1‑80 (MQ=255) | TTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCA > NC_000913/432216‑432364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |