| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 656,725 | T→A | W57R (TGG→AGG) | pagP → | Lipid IVA palmitoyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 656,725 | 0 | T | A | 100.0% | 67.9 / NA | 19 | W57R (TGG→AGG) | pagP | Lipid IVA palmitoyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (13/6); total (13/6) | |||||||||||
ATGACAACGTTTAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCTGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGTTTTGGC > NC_000913/656647‑656799 | aTGACAACGTTTAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAgg > 1:130718/1‑81 (MQ=255) tttAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGt > 1:130725/1‑81 (MQ=255) tAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGtt < 1:130698/80‑1 (MQ=255) tAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGtt < 2:130697/80‑1 (MQ=255) gaAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCt > 1:130723/1‑81 (MQ=255) aaaTATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTa > 1:130726/1‑81 (MQ=255) aaaTATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTa > 2:130719/1‑81 (MQ=255) acaAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAg > 1:130715/1‑80 (MQ=255) cTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAAc > 2:130716/1‑81 (MQ=255) aaCAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATc > 1:130720/1‑81 (MQ=255) aaCAGCCTGAACATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATc < 2:130699/81‑1 (MQ=255) cATTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAg < 2:130700/81‑1 (MQ=255) aTTATGATTTATATATTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGc > 2:130730/1‑81 (MQ=255) tatatTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGt > 2:130722/1‑81 (MQ=255) tatTCCTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTg < 1:130701/80‑1 (MQ=255) ccTGCCATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGt > 1:130734/1‑81 (MQ=255) cATCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGTTTTgg < 2:130702/81‑1 (MQ=255) aTCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGTTTTGGc > 2:130724/1‑81 (MQ=255) aTCACCAGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGTTTTGGc > 2:130727/1‑81 (MQ=255) | ATGACAACGTTTAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCTGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGTTTTGGC > NC_000913/656647‑656799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |