| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 919,229 | A→G | intergenic (‑109/‑6) | ybjX ← / → macA | DUF535 domain‑containing protein YbjX/ABC‑type tripartite efflux pump membrane fusion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 919,229 | 0 | A | G | 100.0% | 63.7 / NA | 19 | intergenic (‑109/‑6) | ybjX/macA | DUF535 domain‑containing protein YbjX/ABC‑type tripartite efflux pump membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/10); total (9/10) | |||||||||||
ACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGAT > NC_000913/919158‑919302 | aCGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATg < 2:175811/80‑1 (MQ=255) gTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGaaa < 2:175812/81‑1 (MQ=255) gTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGaa > 1:175850/1‑80 (MQ=255) ttAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCgg > 2:175846/1‑80 (MQ=255) tAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGa > 2:175835/1‑80 (MQ=255) gggTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGaaaa < 2:175813/81‑1 (MQ=255) gttgATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTga < 2:175814/80‑1 (MQ=255) ttgATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTg > 2:175845/1‑78 (MQ=255) tgATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTgaag > 1:175841/1‑80 (MQ=255) ttAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTgc < 2:175815/81‑1 (MQ=255) aTGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCt > 2:175844/1‑81 (MQ=255) aCCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGt > 2:175840/1‑81 (MQ=255) cGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGAt < 1:175816/81‑1 (MQ=255) cGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGAt < 2:175817/81‑1 (MQ=255) ggATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATa < 1:175818/81‑1 (MQ=255) atGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCg > 2:175849/1‑81 (MQ=255) aGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACt > 2:175854/1‑81 (MQ=255) gTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTg < 1:175819/81‑1 (MQ=255) ttCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGAt < 2:175820/80‑1 (MQ=255) | ACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGAT > NC_000913/919158‑919302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |