| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,512,246 | T→G | V198G (GTT→GGT) | ydcS → | putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,512,246 | 0 | T | G | 100.0% | 77.3 / NA | 22 | V198G (GTT→GGT) | ydcS | putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (10/12); total (10/12) | |||||||||||
CCGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAAA > NC_000913/1512170‑1512322 | ccGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTaa < 1:263345/80‑1 (MQ=255)ccGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTaa < 2:263342/80‑1 (MQ=255)ccGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTa < 1:263343/79‑1 (MQ=255) gACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGcc < 2:263346/81‑1 (MQ=255) gagCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGcc > 2:263377/1‑81 (MQ=255) agCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCg < 1:263347/81‑1 (MQ=255) cAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCg > 1:263380/1‑79 (MQ=255) aaGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTgg < 1:263348/81‑1 (MQ=255) aaGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTgg > 1:263379/1‑81 (MQ=255) gCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCa > 1:263376/1‑81 (MQ=255) ttCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGc > 2:263378/1‑80 (MQ=255) gCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCg < 1:263349/81‑1 (MQ=255) ggCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACt > 1:263383/1‑80 (MQ=255) ccTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCAcc > 2:263387/1‑81 (MQ=255) tatTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCgaag < 2:263350/77‑1 (MQ=255) atTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAg > 1:263381/1‑81 (MQ=255) ttGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGt < 2:263351/81‑1 (MQ=255) ttGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGt < 1:263352/81‑1 (MQ=255) tGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGt > 2:263386/1‑81 (MQ=255) cGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGc < 1:263353/81‑1 (MQ=255) tgttCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTg > 1:263390/1‑80 (MQ=255) ttCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGaaa < 1:263354/81‑1 (MQ=255) | CCGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAAA > NC_000913/1512170‑1512322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |