| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,562,457 | G→A | P9S (CCC→TCC) | ddpA ← | putative D,D‑dipeptide ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,562,457 | 0 | G | A | 100.0% | 64.4 / NA | 18 | P9S (CCC→TCC) | ddpA | putative D,D‑dipeptide ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (10/8); total (10/8) | |||||||||||
CAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAG > NC_000913/1562379‑1562532 | cAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAAc > 2:270321/1‑81 (MQ=255) tCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGaa < 2:270294/81‑1 (MQ=255) tCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGaa < 2:270293/81‑1 (MQ=255) ccAGCATATCTCTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACg < 2:270295/81‑1 (MQ=255) cATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGatat < 1:270296/81‑1 (MQ=255) atatCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATc < 2:270297/81‑1 (MQ=255) tatCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCg < 1:270298/81‑1 (MQ=255) tttGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGAtctc > 1:270323/1‑81 (MQ=255) ggTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGATCTCtt < 2:270299/80‑1 (MQ=255) ggcggcGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGATCTCTTCATGa > 2:270316/1‑80 (MQ=255) ggcgTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGATCTCTTCATGACAGt > 2:270318/1‑81 (MQ=255) ggcgTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGATCTCTTCATGACAGt > 2:270322/1‑81 (MQ=255) gTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGATCTCTTCATGACAGTTTc > 1:270315/1‑81 (MQ=255) aCCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGATCTCTTCATGACAGTTTCCTGAtt > 1:270326/1‑80 (MQ=255) gggAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGAACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACt > 2:270317/1‑81 (MQ=255) aGCAATGTGGAACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACCGACGTGCTGTGTGCCAGGGGTTATaa > 1:270327/1‑80 (MQ=255) cAATGTGGAACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATaaaa > 2:270325/1‑80 (MQ=255) tgtgGAACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAag < 2:270300/81‑1 (MQ=255) | CAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAG > NC_000913/1562379‑1562532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |