Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,598,270 | A→T | intergenic (‑184/+347) | yneO ← / ← lsrK | AIDA‑I family autotransporter YneO/autoinducer‑2 kinase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,598,270 | 0 | A | T | 100.0% | 11.7 / NA | 5 | intergenic (‑184/+347) | yneO/lsrK | AIDA‑I family autotransporter YneO/autoinducer‑2 kinase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (4/1); total (4/1) |
GCTAATTTGCTAATGCTTTCGAATTGATAGATTAAAAATTGCATAGTTCTTATTTTATTTAAATATGAACTATGAGTTATTGTTGCTTAATAAGAAAACTGTTTCTTTCAATAGGAAAATTATCATCATCATA > NC_000913/1598214‑1598346 | gCTAATTTGCTAATGCTTTCGAATTGATAGATTAAAAATTGCATAGTTCTTATTTTTTTTAAATATGAACTATGAGTTAtt > 2:274641/1‑81 (MQ=255) gCTAATTTGCTAATGCTTTCGAATTGATAGATTAAAAATTGCATAGTTCTTATTTTTTTTAAATATGAACCATGAGTTAtt < 1:274628/81‑1 (MQ=255) aTTTGCTAATGCTTTCGAATTGATAGATTAAAAATTGCATAGTTCTTATTTTTTTTAAATATGAACTATGAGTTAttgttg > 2:274640/1‑81 (MQ=255) aaaaTTGCATAGTTCTTATTTTTTTTAAATATGAACTATGAGTTATTGTTGCTTAATAAGAAAACTGTTTCTTTCAATAg > 2:274630/1‑80 (MQ=255) tGCATAGTTCTTATTTTTTTTAAATATGAACTATGAGTTATTGTTGCTTAATAAGAAAACTGTTTCTTTCAATAGGAAAAt > 1:274642/1‑81 (MQ=255) ttttttttAAATATGAACTATGAGTTATTGTTGCTTAATAAGAAAACTGTTTCTTTCAATAGGAAAATTATCATCATCata < 2:274629/81‑1 (MQ=255) | GCTAATTTGCTAATGCTTTCGAATTGATAGATTAAAAATTGCATAGTTCTTATTTTATTTAAATATGAACTATGAGTTATTGTTGCTTAATAAGAAAACTGTTTCTTTCAATAGGAAAATTATCATCATCATA > NC_000913/1598214‑1598346 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |