| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,779,461 | G→C | intergenic (‑160/‑156) | ydiP ← / → ydiQ | putative DNA‑binding transcriptional regulator YdiP/putative electron transfer flavoprotein subunit YdiQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,779,461 | 0 | G | C | 100.0% | 63.7 / NA | 19 | intergenic (‑160/‑156) | ydiP/ydiQ | putative DNA‑binding transcriptional regulator YdiP/putative electron transfer flavoprotein subunit YdiQ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (12/7); total (12/7) | |||||||||||
CGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTGCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCTCCGTCGAAAACCCCG > NC_000913/1779388‑1779537 | cGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACtttt < 1:298187/81‑1 (MQ=255) agagCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGt > 2:298242/1‑81 (MQ=255) agagCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGt > 1:298208/1‑81 (MQ=255) gagCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGtt < 2:298188/81‑1 (MQ=255) aaGATTATTTACACTGAATGCAAGATTGTACAGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATc < 2:298189/81‑1 (MQ=255) gATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGc < 2:298190/81‑1 (MQ=255) acTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTg > 2:298209/1‑81 (MQ=255) aaTGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAg < 2:298191/81‑1 (MQ=255) aaGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGAttgt > 1:298207/1‑81 (MQ=255) aCGGTCATGGAATAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAg > 2:298219/1‑80 (MQ=255) gAATAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCt < 2:298192/81‑1 (MQ=255) aaTAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCtt > 2:298217/1‑81 (MQ=255) aTAACTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTg > 1:298215/1‑81 (MQ=255) aaCTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCt > 1:298220/1‑81 (MQ=255) cTATATTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCTcc > 2:298212/1‑81 (MQ=255) atatTGCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCTCCGt > 2:298213/1‑81 (MQ=255) gCCGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCTCCGTCGaa > 1:298216/1‑80 (MQ=255) ccGCAAATTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCTCCGTCGaaa < 2:298193/80‑1 (MQ=255) aaTTCCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCTCCGTCGAAAACCCCg > 1:298210/1‑81 (MQ=255) | CGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGCCGCAAATTGCACTTTTGTTTTAGCGATCGCATTTTTTTTGCAAGATTGTTGGCAAGGAAAACAGCTTGCTCCGTCGAAAACCCCG > NC_000913/1779388‑1779537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |