| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,121,231 | (A)8→7 | intergenic (‑276/+11) | bssS ← / ← dinI | regulator of biofilm formation/DNA damage‑inducible protein I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,121,224 | 0 | A | . | 100.0% | 46.7 / NA | 12 | intergenic (‑269/+18) | bssS/dinI | regulator of biofilm formation/DNA damage‑inducible protein I |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (7/5); total (7/5) | |||||||||||
TGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCACTGCATATTATTCGCTGACAAACCAGTCATCGGCGCTTTCCCACGTTTCCTGGAG > NC_000913/1121145‑1121289 | tgtgCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCATAATTCGTACGTAAAATAAAAAAGCCGGGGCGACCCGGCa > 2:224688/1‑80 (MQ=255) attattTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCaaaaaaat > 1:224691/1‑80 (MQ=255) tttGATGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGC‑AAAAAAATCACTg > 1:224685/1‑81 (MQ=255) gAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGC‑AAAAAAATCACTGCa > 2:224687/1‑80 (MQ=255) aGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGC‑AAAAAAATCACTGCata < 2:224675/81‑1 (MQ=255) tgtAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGC‑AAAAAAATCACTGCATATTATTc < 2:224676/81‑1 (MQ=255) gAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGC‑AAAAAAATCACTGCATATTATTCGCt > 2:224696/1‑80 (MQ=255) aaaTTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGC‑AAAAAAATTACTGCATATTATTCGCTGa > 1:224693/1‑81 (MQ=255) cGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGC‑AAACACATCACTGCATATTATTCGCTGACAAACCAGTCATCGgcgc < 2:224677/80‑1 (MQ=255) ataaaaAAGCCGGGGCGACCCGGC‑AAAAAAATCACTGCATATTATTCGCTGACAAACCAGTCATCGGCGCTTTCCCACGtt < 1:224678/81‑1 (MQ=255) aaaaaGCCGGGGCGACCCGGC‑AAAAAAATCACTGCATATTATTCGCTGACAAACCAGTCATCGGCGCATTCTCACGTTTcc > 1:224699/1‑81 (MQ=255) aGCCGGGGCGACCCGGC‑AAAAAAATCACTGCATATTATTCGCTGACAAACCAGTCATCGGCGCTTTCCCACGTTTCCTg > 1:224695/1‑79 (MQ=255) aGCCGGGGCGACCCGGC‑AAAAAAATCACTGCATATTATTCGCTGACAAACCAGTCATCGGCGCTTTCCCACGTTTCCTg > 2:224702/1‑79 (MQ=255) gCCGGGGCGACCCGGC‑AAAAAAATCACTGCATATTATTCGCTGACAAACCAGTCATCGGCGCTTTCCCACGTTTCCTGgag < 1:224679/81‑1 (MQ=255) | TGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCACTGCATATTATTCGCTGACAAACCAGTCATCGGCGCTTTCCCACGTTTCCTGGAG > NC_000913/1121145‑1121289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |