| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,583,513 | (T)6→5 | coding (175/762 nt) | ydeO ← | DNA‑binding transcriptional dual regulator YdeO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,583,508 | 0 | T | . | 100.0% | 69.7 / NA | 17 | coding (180/762 nt) | ydeO | DNA‑binding transcriptional dual regulator YdeO |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (11/6); total (11/6) | |||||||||||
AGTCGGTACATTTGAAGCACGTAAAAACTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATATTTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGCGTACGAACAGCG > NC_000913/1583430‑1583583 | aGTCGGTACATTTGAAGCACGTAAAAACTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATAttt > 2:292028/1‑81 (MQ=255) ttGAAGCACGTAAAAACTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTAtt > 1:292023/1‑81 (MQ=255) gAAGCACGTAAAAACTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTAtttt > 2:292030/1‑81 (MQ=255) cACGTAAAAACTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGt < 2:292009/81‑1 (MQ=255) cGTAAAAACTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTaa < 2:292010/81‑1 (MQ=255) aaaaaCTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATc > 2:292040/1‑81 (MQ=255) aaaaCTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATcc < 2:292011/81‑1 (MQ=255) aaaCTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCg < 2:292012/81‑1 (MQ=255) gAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTaa > 1:292029/1‑80 (MQ=255) aGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGc > 2:292027/1‑81 (MQ=255) aCCGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCt < 1:292013/81‑1 (MQ=255) ccGTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCt > 1:292025/1‑80 (MQ=255) gTCACTGTCTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGACGCTCa > 2:292042/1‑80 (MQ=255) cTGGATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTc > 2:292026/1‑80 (MQ=255) gATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCaaaa > 2:292024/1‑81 (MQ=255) gATGTTAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCaaaa > 2:292036/1‑81 (MQ=255) ttAGTGCATTGTAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGc < 1:292014/80‑1 (MQ=255) tAGATA‑TTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGCGTACGAACAGCg > 2:292032/1‑81 (MQ=255) | AGTCGGTACATTTGAAGCACGTAAAAACTTCGCAGGAACAGGCACCGTCACTGTCTGGATGTTAGTGCATTGTAGATATTTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGCGTACGAACAGCG > NC_000913/1583430‑1583583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |