| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,668,684 | (T)5→4 | intergenic (‑120/+15) | mlc ← / ← ynfL | DNA‑binding transcriptional repressor Mlc/putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,668,680 | 0 | T | . | 100.0% | 60.6 / NA | 15 | intergenic (‑116/+19) | mlc/ynfL | DNA‑binding transcriptional repressor Mlc/putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (8/7); total (8/7) | |||||||||||
GTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCA > NC_000913/1668612‑1668756 | gTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAAt > 1:302575/1‑81 (MQ=255) gAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAAttt > 2:302586/1‑81 (MQ=255) gCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTccc < 2:302562/81‑1 (MQ=255) aCTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTc < 2:302563/81‑1 (MQ=255) tACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTgag < 1:302564/81‑1 (MQ=255) gtgtCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGagag > 1:302584/1‑80 (MQ=255) tgtCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCa < 1:302565/81‑1 (MQ=255) cAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTcag > 1:302581/1‑80 (MQ=255) tttACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATg < 1:302566/80‑1 (MQ=255) cATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGt > 1:302587/1‑81 (MQ=255) aTGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGt > 1:302590/1‑80 (MQ=255) tttCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTg < 1:302567/80‑1 (MQ=255) tttCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTg < 2:302568/80‑1 (MQ=255) tttCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGt > 2:302585/1‑81 (MQ=255) cGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCa > 1:302571/1‑81 (MQ=255) | GTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCA > NC_000913/1668612‑1668756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |