| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,803,390 | (A)6→5 | pseudogene (297/1900 nt) | arpB → | putative ankyrin repeat protein B, N‑terminal fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,803,385 | 0 | A | . | 100.0% | 42.9 / NA | 11 | pseudogene (292/1900 nt) | arpB | putative ankyrin repeat protein B, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (3/8); total (3/8) | |||||||||||
CCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTATAAAAAAGAAATCATTTCCTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGAAGCATACTGGA > NC_000913/1803311‑1803455 | ccACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTATaaaaag < 1:321183/80‑2 (MQ=255) cACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTATaaaaagaa < 2:321184/81‑4 (MQ=255) cACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTATaaaaaga > 1:321201/1‑78 (MQ=255) gCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCa > 1:321204/1‑81 (MQ=255) cccTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCa < 2:321185/80‑1 (MQ=255) cTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCAttt < 2:321186/81‑1 (MQ=255) tttACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCATTTcc < 1:321187/80‑1 (MQ=255) ccATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCATTTCCttat < 2:321188/80‑1 (MQ=255) tAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCATTTCCTTATTACTg > 2:321209/1‑81 (MQ=255) aCTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCATTTCCTTATTACTGGa < 2:321189/81‑1 (MQ=255) ccACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCATTTCCTTATTACTGGAAACCAc < 1:321190/81‑1 (MQ=255) gAAAATATACTCATTACATTACACTAT‑AAAAAGAAATCATTTCCTTATTACTGGAAACCACGCCTATTAAAGCTAACCAtt < 1:321191/81‑1 (MQ=255) cTCATTACATTACACTAT‑AAAAAGAAATCATTTCCTTATTACTGGAAACTACGCCTATTAAAGCTAACCATTTGCGAAGCa > 2:321210/1‑81 (MQ=255) cattacaCTAT‑AAAAAGAAATCATTTCCTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGAAGCATACTGGa < 1:321192/81‑1 (MQ=255) | CCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTATAAAAAAGAAATCATTTCCTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGAAGCATACTGGA > NC_000913/1803311‑1803455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |