| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,812,746 | (T)6→5 | coding (387/804 nt) | ydjO ← | protein YdjO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,812,741 | 0 | T | . | 100.0% | 38.1 / NA | 10 | coding (392/804 nt) | ydjO | protein YdjO |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (4/6); total (4/6) | |||||||||||
CAGCAAAAATGCTCCCGACAGGATGTATATAATTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTGTTTTTTATACTGATCAAATTGGTCATTTTTTCTGGGCGAAATACAGAAGTGACATCCATTCCAATAAAA > NC_000913/1812664‑1812809 | cagcaAAAATGCTCCCGACAGGATGTATATAATTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTGtttt < 1:322347/81‑1 (MQ=255) caAAAATGCTCCCGACAGGATGTATATAATTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTGttttta > 1:322358/1‑79 (MQ=255) aaaTGCTCCCGACAGGATGTATATAATTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTG‑TTTTTATACt > 1:322359/1‑81 (MQ=255) aaTGCTCCCGACAGGATGTATATAATTTTGTGCATAGTATATAGTCCTTAAATAGAGAATAACCATCCTG‑TTTTTATACTg < 1:322348/81‑1 (MQ=255) tGCTCCCGACAGGATGTATATAATTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTG‑TTTTTATACTGAt < 1:322349/81‑1 (MQ=255) ggATGTATATAATTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTG‑TTTTTATACTGATCAAATTGGTCa > 1:322360/1‑81 (MQ=255) aTTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTG‑TTTTTATACTGATCAAATTGGTCATTTTTTCTggg < 1:322351/81‑1 (MQ=255) aTTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTG‑TTTTTATACTGATCAAATTGGTCATTTTCTCTggg < 1:322350/81‑1 (MQ=255) tAAATAGTGAATAACCAACCTG‑TTTTTATACTGATCAAATTGGTCATTTTTTCTGGGCGAAATACAGAAGTGACATCCAtt > 2:322361/1‑81 (MQ=255) aaaTAGTGAATAACCAACCTG‑TTTTTATACTGATCAAATTGGTCATTTTTTCTGGGCGAAATACAGAAGTGACATCCAtt < 2:322352/80‑1 (MQ=255) gTGAATAACCAACCTG‑TTTTTATACTGATCAAATTGGTCATTTTTTCTGGGCGAAATACAGAAGTGACATCCATTCCAAt < 1:322353/80‑1 (MQ=255) aaTAACCAACCTG‑TTTTTATACTGATCAAATTGGTCATTTTTTCTGGGCGAAATACAGAAGTGACATCCATTCCAATaaaa > 2:322364/1‑81 (MQ=255) | CAGCAAAAATGCTCCCGACAGGATGTATATAATTTTGTTCATAGTATATAGTCCTTAAATAGTGAATAACCAACCTGTTTTTTATACTGATCAAATTGGTCATTTTTTCTGGGCGAAATACAGAAGTGACATCCATTCCAATAAAA > NC_000913/1812664‑1812809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |