Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,523,941	Δ1 bp	coding (45/1257 nt)	xapB ←	xanthosine:H(+) symporter XapB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,523,938	0	A	.	100.0%	83.2 / NA	20	coding (48/1257 nt)	xapB	xanthosine:H(+) symporter XapB
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (11/9);  total (11/9)

CATGCCAACATTAGCGCCGGTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGATAAAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGTTTCCTTGTCGCATCATTTGGC  >  NC_000913/2523860‑2524012                                                                               |                                                                           cATGCCAACATTAGCGCCGGTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGATaaa                                                                          <  1:444334/81‑1 (MQ=255)         cATTAGCGCCGGTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCaa                                                                 <  1:444335/81‑1 (MQ=255)         cATTAGCGCCGGTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCaa                                                                 <  1:444336/81‑1 (MQ=255)              gcgcCGGTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAg                                                             >  1:444371/1‑80 (MQ=255)                gcCGGTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGa                                                           >  2:444374/1‑80 (MQ=255)                   ggTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACAtt                                                       <  1:444337/81‑1 (MQ=255)                   ggTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACAt                                                        >  2:444368/1‑80 (MQ=255)                        aaTGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCtt                                                  >  2:444366/1‑81 (MQ=255)                               agTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAgcgc                                           <  2:444338/81‑1 (MQ=255)                               agTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAgcg                                            >  1:444363/1‑80 (MQ=255)                                   ttAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATc                                        <  1:444339/80‑1 (MQ=255)                                       tCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGAt                                   >  2:444380/1‑81 (MQ=255)                                         aTGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGc                                 >  2:444365/1‑81 (MQ=255)                                            tAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCa                              >  1:444364/1‑81 (MQ=255)                                             aaGAGCCGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCa                              >  2:444378/1‑80 (MQ=255)                                                   cGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGt                       >  2:444369/1‑81 (MQ=255)                                                   cGAGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGt                       >  2:444370/1‑81 (MQ=255)                                                     aGGGTAACCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGttt                     <  1:444340/81‑1 (MQ=255)                                                           aCCAGCCAGCTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGTTTCCTTGt               <  1:444341/81‑1 (MQ=255)                                                                 cagcTCCCCCAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGTTTCCTTGTCGcatc         <  2:444342/81‑1 (MQ=255)                                                                        cccAGAT‑AAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGTTTCCTTGTCGCATCATTTGGc  <  1:444343/81‑1 (MQ=255)                                                                               |                                                                           CATGCCAACATTAGCGCCGGTGAAATGAAGAGTATTAATCATGTAAGAGCCGAGGGTAACCAGCCAGCTCCCCCAGATAAAATATTGCAAAAAGGACATTACCTTTAAGCGCATCGCGATGCTCATAATCGTTTCCTTGTCGCATCATTTGGC  >  NC_000913/2523860‑2524012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑