| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 314,734 | Δ1 bp | pseudogene (378/888 nt) | eaeH → | putative porin domain‑containing protein EaeH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 314,732 | 0 | A | . | 100.0% | 77.8 / NA | 19 | pseudogene (376/888 nt) | eaeH | putative porin domain‑containing protein EaeH |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (7/12); total (7/12) | |||||||||||
AGCTAAAGCTAACCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGATAAAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTTCAC > NC_000913/314659‑314808 | agctaaagctaaCCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTtc > 1:70640/1‑81 (MQ=255) aCCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAg < 1:70607/79‑1 (MQ=255) aCCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGa < 2:70608/81‑1 (MQ=255) aGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGa < 2:70609/81‑1 (MQ=255) ggAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGaa < 1:70610/81‑1 (MQ=255) ggAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGaa < 1:70611/81‑1 (MQ=255) gTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATg < 2:70612/81‑1 (MQ=255) gTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATg < 2:70613/81‑1 (MQ=255) tGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGc > 2:70650/1‑81 (MQ=255) gCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCtt > 2:70652/1‑81 (MQ=255) gAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCCGAAGGATTCTTCGCTGGAAATGCTTTATcc > 2:70643/1‑80 (MQ=255) gTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGa < 1:70614/81‑1 (MQ=255) cTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATAc < 1:70615/81‑1 (MQ=255) cAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACaaa > 1:70658/1‑80 (MQ=255) aaaCTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAata > 2:70649/1‑81 (MQ=255) tGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATAtgtt > 2:70657/1‑81 (MQ=255) tGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTTc < 1:70616/81‑1 (MQ=255) tCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTTCAc < 2:70617/81‑1 (MQ=255) tCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTAAGATACGCCGACAAATATGTTGTTCa < 1:70618/80‑1 (MQ=255) | AGCTAAAGCTAACCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGATAAAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTTCAC > NC_000913/314659‑314808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |