| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,774,809 | (A)7→6 | coding (1492/1704 nt) | yfjW → | CP4‑57 prophage; uncharacterized protein YfjW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,774,803 | 0 | A | . | 100.0% | 56.6 / NA | 14 | coding (1486/1704 nt) | yfjW | CP4‑57 prophage; uncharacterized protein YfjW |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (8/6); total (8/6) | |||||||||||
ACATTTGTCGTTAAGGCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGCAAAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAACCTTCGTAAAATAAC > NC_000913/2774730‑2774876 | aCATTTGTCGTTAAGGCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGCaaaaaatc < 2:496964/81‑3 (MQ=255) gTTAAGGCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAatatat > 1:496980/1‑81 (MQ=255) gTTAAGGCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAatatat > 2:496979/1‑81 (MQ=255) gCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGca > 2:496975/1‑79 (MQ=255) aGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCAcag > 1:496978/1‑79 (MQ=255) agaTTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGt > 2:496985/1‑81 (MQ=255) tCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGAt < 2:496965/80‑1 (MQ=255) gAAGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAAc > 2:496982/1‑80 (MQ=255) aaGGGAGTTTGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAAc > 2:496976/1‑79 (MQ=255) tttGTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATg < 2:496966/81‑1 (MQ=255) gTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGaa < 1:496967/80‑1 (MQ=255) gTATGGACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAAc > 2:496986/1‑81 (MQ=255) gACTAGTTAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAACCTTCg < 2:496968/81‑1 (MQ=255) ttAATAAAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAGCCTTCGTAAAAt < 2:496969/81‑1 (MQ=255) ataaAAGC‑AAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAACCTTCGTAAAATAAc < 1:496970/81‑1 (MQ=255) | ACATTTGTCGTTAAGGCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGCAAAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAACCTTCGTAAAATAAC > NC_000913/2774730‑2774876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |